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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001163465.2 → NP_001156937.1 rhophilin-1 isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC116393
- Consensus CDS
-
CCDS49641.1
- UniProtKB/TrEMBL
- E9Q7Q7, Q5DTT9
- Related
- ENSMUSP00000113042.2, ENSMUST00000121137.9
- Conserved Domains (3) summary
-
- cd09248
Location:116 → 498
- BRO1_Rhophilin_1; Protein-interacting Bro1-like domain of RhoA-binding protein Rhophilin-1
- cd11633
Location:28 → 112
- HR1_Rhophilin-1; Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Rhophilin-1
- cd00992
Location:519 → 593
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
-
NM_001411251.1 → NP_001398180.1 rhophilin-1 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC116393
- UniProtKB/TrEMBL
-
Q5DTT9
-
NM_008164.3 → NP_032190.2 rhophilin-1 isoform 2
See identical proteins and their annotated locations for NP_032190.2
Status: VALIDATED
- Source sequence(s)
-
AC116393
- Consensus CDS
-
CCDS27548.1
- UniProtKB/Swiss-Prot
- E9QMX9, Q61085
- UniProtKB/TrEMBL
-
Q5DTT9
- Related
- ENSMUSP00000023244.6, ENSMUST00000023244.6
- Conserved Domains (3) summary
-
- cd09248
Location:116 → 498
- BRO1_Rhophilin_1; Protein-interacting Bro1-like domain of RhoA-binding protein Rhophilin-1
- cd11633
Location:28 → 112
- HR1_Rhophilin-1; Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Rhophilin-1
- cd00992
Location:501 → 575
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000081.7 Reference GRCm39 C57BL/6J
- Range
-
75576097..75586268
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017316433.3 → XP_017171922.1 rhophilin-1 isoform X2
- Conserved Domains (2) summary
-
- cd00992
Location:290 → 364
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cl14649
Location:3 → 269
- BRO1_Alix_like; Protein-interacting Bro1-like domain of mammalian Alix and related domains
-
XM_017316434.2 → XP_017171923.1 rhophilin-1 isoform X3
- Conserved Domains (2) summary
-
- cd00992
Location:289 → 363
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cl14649
Location:3 → 268
- BRO1_Alix_like; Protein-interacting Bro1-like domain of mammalian Alix and related domains