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    SVL3 Svl3p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 856075, updated on 9-Dec-2024

    Summary

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    Official Symbol
    SVL3
    Official Full Name
    Svl3p
    Primary source
    SGD:S000005953
    Locus tag
    YPL032C
    See related
    AllianceGenome:SGD:S000005953; FungiDB:YPL032C; VEuPathDB:YPL032C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Involved in endocytosis. Located in cellular bud neck and cellular bud tip. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See SVL3 in Genome Data Viewer
    Location:
    chromosome: XVI
    Exon count:
    1
    Sequence:
    Chromosome: XVI; NC_001148.4 (488887..491364, complement)

    Chromosome XVI - NC_001148.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Srl4p Neighboring gene cyclin-dependent serine/threonine-protein kinase PHO85 Neighboring gene tRNA (uracil) methyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001148.4

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional characteristics of Svl3 and Pam1 that are required for proper cell wall formation in yeast cells. Jin Y, et al. Yeast, 2020 Jul. PMID 32491201
    2. Isolation of yeast mutants defective for localization of vacuolar vital dyes. Zheng B, et al. Proc Natl Acad Sci U S A, 1998 Sep 29. PMID 9751732, Free PMC Article
    3. Osw2 is required for proper assembly of glucan and/or mannan layers of the yeast spore wall. Pan HP, et al. J Biochem, 2018 Apr 1. PMID 29211891
    4. The S-Phase Cyclin Clb5 Promotes rRNA Gene (rDNA) Stability by Maintaining Replication Initiation Efficiency in rDNA. Goto M, et al. Mol Cell Biol, 2021 Apr 22. PMID 33619126, Free PMC Article
    5. A computationally guided protein-interaction screen uncovers coiled-coil interactions involved in vesicular trafficking. Zhang H, et al. J Mol Biol, 2009 Sep 11. PMID 19591838

    See all (53) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Functional characteristics of Svl3 and Pam1 that are required for proper cell wall formation in yeast cells.
      Title: Functional characteristics of Svl3 and Pam1 that are required for proper cell wall formation in yeast cells.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in endocytosis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell cortex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cell periphery HDA PubMed 
    located_in cellular bud HDA PubMed 
    located_in cellular bud IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cellular bud neck HDA PubMed 
    located_in cellular bud neck IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cellular bud neck IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cellular bud tip HDA PubMed 
    located_in cellular bud tip IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytoplasm HDA PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Svl3p
    NP_015293.1
    • hypothetical protein; mutant phenotype suggests a potential role in vacuolar function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery, cytoplasm, bud, and bud neck; relocalizes from bud neck to cytoplasm upon DNA replication stress; SVL3 has a paralog, PAM1, that arose from the whole genome duplication

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001148.4 Reference assembly

      Range
      488887..491364 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001183846.1 → NP_015293.1  TPA: Svl3p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_015293.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W3Y1, Q03088
      UniProtKB/TrEMBL
      A6ZWL5, C7GU21
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q03088.1

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