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    Pou5f1-rs4 POU domain, class 5, transcription factor 1, related sequence 4 [ Mus musculus (house mouse) ]

    Gene ID: 435755, updated on 17-Aug-2024

    Summary

    Official Symbol
    Pou5f1-rs4provided by MGI
    Official Full Name
    POU domain, class 5, transcription factor 1, related sequence 4provided by MGI
    Primary source
    MGI:MGI:101889
    See related
    Ensembl:ENSMUSG00000105712 AllianceGenome:MGI:101889
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Otf3d; Gm5712; Oct4P1; Otf3-rs4
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    Genomic context

    See Pou5f1-rs4 in Genome Data Viewer
    Location:
    3 G3; 3 58.05 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (129227322..129228361)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (129433673..129434712)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene glutamyl aminopeptidase Neighboring gene STARR-positive B cell enhancer mm9_chr3:129124737-129125037 Neighboring gene predicted gene, 35787 Neighboring gene ribosomal protein L7A, pseudogene 7 Neighboring gene STARR-seq mESC enhancer starr_08968 Neighboring gene STARR-seq mESC enhancer starr_08969 Neighboring gene predicted gene, 35986 Neighboring gene ELOVL fatty acid elongase 6

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_033594.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC110248
      Related
      ENSMUST00000199748.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      129227322..129228361
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)