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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001113498.3 → NP_001106970.4 MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AL157792, AL162551, AL358832, AL359951, AL591771
- Consensus CDS
-
CCDS45098.4
- UniProtKB/Swiss-Prot
- F6W3S7, J3KPX6, Q7Z553
- Related
- ENSP00000382178.4, ENST00000399232.8
- Conserved Domains (6) summary
-
- smart00408
Location:325 → 386
- IGc2; Immunoglobulin C-2 Type
- smart00409
Location:117 → 197
- IG; Immunoglobulin
- pfam00629
Location:817 → 989
- MAM; MAM domain, meprin/A5/mu
- pfam13927
Location:510 → 587
- Ig_3; Immunoglobulin domain
- cd00096
Location:511 → 514
- Ig; Ig strand A [structural motif]
- cl11960
Location:418 → 493
- Ig; Immunoglobulin domain
-
NM_182830.4 → NP_878250.2 MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform 2
See identical proteins and their annotated locations for NP_878250.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and has multiple 5' coding region differences, compared to variant 1. These differences cause translation initiation at a downstream AUG and an isoform (2) with a shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AL591771, AY369208, BC028193, DB095976
- Consensus CDS
-
CCDS41948.1
- Conserved Domains (6) summary
-
- cd06263
Location:519 → 690
- MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
- cd00096
Location:126 → 198
- Ig; Immunoglobulin domain
- smart00408
Location:27 → 88
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:222 → 307
- IG_like; Immunoglobulin like
- pfam00629
Location:519 → 692
- MAM; MAM domain, meprin/A5/mu
- pfam13895
Location:314 → 389
- Ig_2; Immunoglobulin domain
RNA
-
NR_103766.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) has multiple differences compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL359951, BC028193, DB095976
- Related
-
ENST00000482848.7
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000014.9 Reference GRCh38.p14 Primary Assembly
- Range
-
46839623..47675605 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011536519.3 → XP_011534821.1 MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X1
- UniProtKB/Swiss-Prot
- F6W3S7, J3KPX6, Q7Z553
- Conserved Domains (6) summary
-
- cd06263
Location:772 → 943
- MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
- cd00096
Location:379 → 451
- Ig; Immunoglobulin domain
- smart00408
Location:280 → 341
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:72 → 152
- IG_like; Immunoglobulin like
- pfam00629
Location:772 → 945
- MAM; MAM domain, meprin/A5/mu
- pfam13895
Location:567 → 642
- Ig_2; Immunoglobulin domain
-
XM_047431048.1 → XP_047287004.1 MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X2
- Related
- ENSP00000349925.3, ENST00000357362.7
-
XM_047431049.1 → XP_047287005.1 MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X2
-
XM_047431050.1 → XP_047287006.1 MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X2
-
XM_017021060.2 → XP_016876549.1 MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X4
- UniProtKB/Swiss-Prot
-
Q7Z553
- Conserved Domains (5) summary
-
- cd06263
Location:363 → 534
- MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
- smart00408
Location:72 → 137
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:66 → 151
- IG_like; Immunoglobulin like
- pfam00629
Location:363 → 536
- MAM; MAM domain, meprin/A5/mu
- pfam13895
Location:158 → 233
- Ig_2; Immunoglobulin domain
-
XM_011536525.3 → XP_011534827.1 MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X7
- Conserved Domains (5) summary
-
- cd06263
Location:308 → 479
- MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
- smart00408
Location:17 → 82
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:11 → 96
- IG_like; Immunoglobulin like
- pfam00629
Location:308 → 481
- MAM; MAM domain, meprin/A5/mu
- pfam13895
Location:103 → 178
- Ig_2; Immunoglobulin domain
-
XM_011536522.4 → XP_011534824.1 MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X3
- Conserved Domains (3) summary
-
- cd00096
Location:424 → 496
- Ig; Immunoglobulin domain
- smart00408
Location:325 → 386
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:117 → 197
- IG_like; Immunoglobulin like
-
XM_047431051.1 → XP_047287007.1 MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X5
-
XM_017021061.3 → XP_016876550.1 MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X6
Alternate T2T-CHM13v2.0
Genomic
-
NC_060938.1 Alternate T2T-CHM13v2.0
- Range
-
41038514..41874449 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054375504.1 → XP_054231479.1 MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X1
- UniProtKB/Swiss-Prot
- F6W3S7, J3KPX6, Q7Z553
-
XM_054375505.1 → XP_054231480.1 MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X2
-
XM_054375506.1 → XP_054231481.1 MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X2
-
XM_054375507.1 → XP_054231482.1 MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X2
-
XM_054375509.1 → XP_054231484.1 MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X4
-
XM_054375512.1 → XP_054231487.1 MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X7
-
XM_054375508.1 → XP_054231483.1 MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X3
-
XM_054375510.1 → XP_054231485.1 MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X5
-
XM_054375511.1 → XP_054231486.1 MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X6