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    Or5ap2 olfactory receptor family 5 subfamily AP member 2 [ Mus musculus (house mouse) ]

    Gene ID: 258573, updated on 9-Dec-2024

    Summary

    Official Symbol
    Or5ap2provided by MGI
    Official Full Name
    olfactory receptor family 5 subfamily AP member 2provided by MGI
    Primary source
    MGI:MGI:3030854
    See related
    Ensembl:ENSMUSG00000046975 AllianceGenome:MGI:3030854
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    MOR201-2; Olfr1020
    Summary
    Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. [provided by RefSeq, Jul 2008]
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    Genomic context

    See Or5ap2 in Genome Data Viewer
    Location:
    2 D; 2 49.68 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (85679764..85680842)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (85849420..85850498)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 2 subfamily AH member 1 Neighboring gene olfactory receptor family 5 subfamily AR member 1 Neighboring gene olfactory receptor family 5 subfamily AP member 2B, pseudogene 1 Neighboring gene olfactory receptor family 5 subfamily M member 10B

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables odorant binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables olfactory receptor activity ISA
    Inferred from Sequence Alignment
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in membrane ISA
    Inferred from Sequence Alignment
    more info
    PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    olfactory receptor 5AP2
    Names
    GA_x6K02T2Q125-47327964-47328917
    olfactory receptor 1020
    olfactory receptor 201-2
    olfactory receptor MOR201-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_146580.2NP_666791.1  olfactory receptor 5AP2

      See identical proteins and their annotated locations for NP_666791.1

      Status: VALIDATED

      Source sequence(s)
      AL928687
      Consensus CDS
      CCDS16224.1
      UniProtKB/Swiss-Prot
      A0A1L1STE7, Q0VEQ7, Q8VFK7
      Related
      ENSMUSP00000058242.5, ENSMUST00000055840.7
      Conserved Domains (2) summary
      pfam00001
      Location:48297
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:38312
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      85679764..85680842
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)