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    Zfp804b zinc finger protein 804B [ Mus musculus (house mouse) ]

    Gene ID: 207618, updated on 27-Nov-2024

    Summary

    Official Symbol
    Zfp804bprovided by MGI
    Official Full Name
    zinc finger protein 804Bprovided by MGI
    Primary source
    MGI:MGI:2685287
    See related
    Ensembl:ENSMUSG00000092094 AllianceGenome:MGI:2685287
    Gene type
    protein coding
    RefSeq status
    INFERRED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm441
    Summary
    Predicted to be active in nucleus. Orthologous to human ZNF804B (zinc finger protein 804B). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
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    Genomic context

    See Zfp804b in Genome Data Viewer
    Location:
    5 A1; 5 3.2 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (6819030..7394378, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (6769030..7344378, complement)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_12364 Neighboring gene zinc finger protein 28 pseudogene Neighboring gene STARR-seq mESC enhancer starr_12368 Neighboring gene STARR-seq mESC enhancer starr_12369 Neighboring gene predicted gene 5714 Neighboring gene small nuclear ribonucleoprotein-associated protein N pseudogene Neighboring gene STARR-seq mESC enhancer starr_12370 Neighboring gene tubulin, beta 4B class IVB, pseudogene 1 Neighboring gene STARR-seq mESC enhancer starr_12371 Neighboring gene predicted gene, 24525 Neighboring gene STARR-seq mESC enhancer starr_12372 Neighboring gene STARR-seq mESC enhancer starr_12373 Neighboring gene testis expressed 47 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene predicted gene, 57840

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001163223.1NP_001156695.1  zinc finger protein 804B

      Status: INFERRED

      Source sequence(s)
      AC112662, AC112938, AC115629
      Consensus CDS
      CCDS80204.1
      UniProtKB/TrEMBL
      A0A0G2JGH6, F6QGP8
      Related
      ENSMUSP00000143568.2, ENSMUST00000200317.5
      Conserved Domains (1) summary
      pfam12171
      Location:5683
      zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      6819030..7394378 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)