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    Gm16551 predicted gene 16551 [ Mus musculus (house mouse) ]

    Gene ID: 100503019, updated on 22-Oct-2024

    Summary

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    Official Symbol
    Gm16551provided by MGI
    Official Full Name
    predicted gene 16551provided by MGI
    Primary source
    MGI:MGI:4414971
    See related
    Ensembl:ENSMUSG00000066477 AllianceGenome:MGI:4414971
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in liver E18 (RPKM 27.3), CNS E11.5 (RPKM 4.1) and 1 other tissue See more
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    Genomic context

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    See Gm16551 in Genome Data Viewer
    Location:
    9 D; 9 41.91 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (74755719..74760154)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (74848437..74852872)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 40533 Neighboring gene predicted gene, 33562 Neighboring gene predicted gene, 22315 Neighboring gene STARR-seq mESC enhancer starr_24650 Neighboring gene one cut domain, family member 1 Neighboring gene predicted gene, 38678 Neighboring gene STARR-positive B cell enhancer ABC_E8300 Neighboring gene STARR-positive B cell enhancer ABC_E6765 Neighboring gene STARR-positive B cell enhancer ABC_E714 Neighboring gene STARR-positive B cell enhancer mm9_chr9:74812784-74813085 Neighboring gene STARR-positive B cell enhancer mm9_chr9:74813338-74813639 Neighboring gene atos homolog A Neighboring gene microRNA 1970c

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Reevaluation of the Role of Extracellular Signal-Regulated Kinase 3 in Perinatal Survival and Postnatal Growth Using New Genetically Engineered Mouse Models. Soulez M, et al. Mol Cell Biol, 2019 Mar 15. PMID 30642949, Free PMC Article
    2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
    3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_045284.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC100600, AK051235, BY718564
      Related
      ENSMUST00000160979.10

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      74755719..74760154
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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