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    Tcp11x2 t-complex 11 family, X-linked 2 [ Mus musculus (house mouse) ]

    Gene ID: 71841, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tcp11x2provided by MGI
    Official Full Name
    t-complex 11 family, X-linked 2provided by MGI
    Primary source
    MGI:MGI:1919091
    See related
    Ensembl:ENSMUSG00000058252 AllianceGenome:MGI:1919091
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    TCP11; Tcp11l3; 1700008I05Rik
    Summary
    Predicted to be involved in protein kinase A signaling and regulation of sperm capacitation. Predicted to be active in acrosomal vesicle and sperm flagellum. Orthologous to several human genes including TCP11X2 (t-complex 11 family, X-linked 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward testis adult (RPKM 6.6) See more
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    Genomic context

    See Tcp11x2 in Genome Data Viewer
    Location:
    X F1; X 57.26 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (134555447..134594539, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (135654698..135693790, complement)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene nuclear RNA export factor 7 Neighboring gene PRAME like, X-linked 1 Neighboring gene NSA2 ribosome biogenesis homolog pseudogene Neighboring gene STARR-seq mESC enhancer starr_47970 Neighboring gene thymosin beta 15a Neighboring gene G protein-coupled receptor associated sorting protein 1 Neighboring gene armadillo repeat containing, X-linked 5 Neighboring gene microRNA 7646

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in protein kinase A signaling IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of sperm capacitation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in acrosomal vesicle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in sperm flagellum IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    T-complex protein 11 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_027952.3NP_082228.2  T-complex protein 11 homolog

      See identical proteins and their annotated locations for NP_082228.2

      Status: VALIDATED

      Source sequence(s)
      AK005772, BC141320, BU961951, BY457483
      Consensus CDS
      CCDS41129.1
      UniProtKB/TrEMBL
      A2AEI7, Q9DAK1
      Related
      ENSMUSP00000077676.7, ENSMUST00000078605.7
      Conserved Domains (1) summary
      pfam05794
      Location:65484
      Tcp11; T-complex protein 11

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      134555447..134594539 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)