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    3110006O06Rik RIKEN cDNA 3110006O06 gene [ Mus musculus (house mouse) ]

    Gene ID: 73093, updated on 22-Oct-2024

    Summary

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    Official Symbol
    3110006O06Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 3110006O06 geneprovided by MGI
    Primary source
    MGI:MGI:1920343
    See related
    Ensembl:ENSMUSG00000114649 AllianceGenome:MGI:1920343
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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    Genomic context

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    See 3110006O06Rik in Genome Data Viewer
    Location:
    13; 13 C1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (78319407..78331092)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (78171288..78182973)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene ARB2 cotranscriptional regulator A Neighboring gene POU domain class 5, transcription factor 2 Neighboring gene STARR-seq mESC enhancer starr_35075 Neighboring gene ATPase, H+ transporting, lysosomal V1 subunit A pseudogene Neighboring gene STARR-seq mESC enhancer starr_35076 Neighboring gene predicted gene, 38604 Neighboring gene RIKEN cDNA A830082K12 gene Neighboring gene STARR-seq mESC enhancer starr_35077 Neighboring gene STARR-seq mESC enhancer starr_35078 Neighboring gene nuclear receptor subfamily 2, group F, member 1 Neighboring gene STARR-seq mESC enhancer starr_35079 Neighboring gene nucleoside diphosphate kinase A pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
    2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      78319407..78331092
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_003950646.1 RNA Sequence

      Related
      ENSMUST00000225503.3
    Nucleotide Protein Strain
    Heading Accession and Version

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