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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001290138.1 → NP_001277067.1 coiled-coil domain-containing protein 169 isoform b
See identical proteins and their annotated locations for NP_001277067.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) contains an alternate 5' terminal exon, and it thus differs in the 5' UTR and initiates translation at a downstream in-frame start codon, compared to variant 1. The encoded isoform (b) is shorter at the N-terminus, compared to isoform a. Both variants 2 and 3 encode isoform b.
- Source sequence(s)
-
AC111132, AI467609, AK042903
- Consensus CDS
-
CCDS79907.1
- UniProtKB/Swiss-Prot
-
Q8BXX9
- Related
- ENSMUSP00000049698.5, ENSMUST00000052904.11
- Conserved Domains (1) summary
-
- pfam15372
Location:1 → 99
- DUF4600; Domain of unknown function (DUF4600)
-
NM_001290141.1 → NP_001277070.1 coiled-coil domain-containing protein 169 isoform b
See identical proteins and their annotated locations for NP_001277070.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) contains an alternate 5' terminal exon, and it thus differs in the 5' UTR and initiates translation at a downstream in-frame start codon, compared to variant 1. The encoded isoform (b) is shorter at the N-terminus, compared to isoform a. Both variants 2 and 3 encode isoform b.
- Source sequence(s)
-
AC111132, AI467609, AK042903, AK076919
- Consensus CDS
-
CCDS79907.1
- UniProtKB/Swiss-Prot
-
Q8BXX9
- Conserved Domains (1) summary
-
- pfam15372
Location:1 → 99
- DUF4600; Domain of unknown function (DUF4600)
-
NM_177203.3 → NP_796177.2 coiled-coil domain-containing protein 169 isoform a
See identical proteins and their annotated locations for NP_796177.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (a).
- Source sequence(s)
-
AI467609, AK042903, AK076919
- Consensus CDS
-
CCDS17357.2
- UniProtKB/Swiss-Prot
- Q8BVQ6, Q8BXX9
- UniProtKB/TrEMBL
-
D3YWT6
- Related
- ENSMUSP00000054771.8, ENSMUST00000061099.14
- Conserved Domains (1) summary
-
- pfam15372
Location:55 → 181
- DUF4600; Domain of unknown function (DUF4600)
RNA
-
NR_110776.1 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) contains an additional internal exon in the 3' region, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC111132, AI467609, AK042903, AK076919
-
NR_110780.1 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) lacks an exon in the 5' region and includes an additional internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AI467609, AK042903, AK076919, BC171976
-
NR_110781.1 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) lacks an exon in the 5' region and includes two additional internal exons, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AI467609, AK042903, AK076919, BC171978