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    Defb44-ps defensin beta 44, pseudogene [ Mus musculus (house mouse) ]

    Gene ID: 654454, updated on 17-Aug-2024

    Summary

    Official Symbol
    Defb44-psprovided by MGI
    Official Full Name
    defensin beta 44, pseudogeneprovided by MGI
    Primary source
    MGI:MGI:3646526
    See related
    Ensembl:ENSMUSG00000070977 AllianceGenome:MGI:3646526
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Defb44; Defb49; EG574082; Defb49-ps
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See Defb44-ps in Genome Data Viewer
    Location:
    1 A3; 1 5.7 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (18280277..18293798, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (18210053..18223564, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene NLR family, pyrin domain containing 4F pseudogene Neighboring gene centromere protein E pseudogene Neighboring gene STARR-seq mESC enhancer starr_00369 Neighboring gene STARR-seq mESC enhancer starr_00370 Neighboring gene cysteine-rich secretory protein 4 Neighboring gene STARR-seq mESC enhancer starr_00371 Neighboring gene STARR-seq mESC enhancer starr_00372 Neighboring gene defensin beta 18 Neighboring gene defensin beta 41 Neighboring gene nucleolin pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_002879.3 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC161367
      Related
      ENSMUST00000126871.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      18280277..18293798 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)