Apon apolipoprotein N [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Aponprovided by MGI
Official Full Name: apolipoprotein Nprovided by MGI
Primary source: MGI:MGI:88931
See related: Ensembl:ENSMUSG00000051716 AllianceGenome:MGI:88931
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: D10Ucla2
Summary: Predicted to be involved in cholesterol metabolic process. Predicted to be located in cytoplasm. Predicted to be active in extracellular space. Orthologous to human APONP (apolipoprotein N, pseudogene). [provided by Alliance of Genome Resources, Nov 2024]
Expression: Restricted expression toward liver adult (RPKM 149.6) See more
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Genomic context

Location:: 10 D3; 10 76.5 cM

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	10	NC_000076.7 (128090000..128091770)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	10	NC_000076.6 (128254131..128255901)

Chromosome 10 - NC_000076.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

AI195275 (e-PCR)
- UniSTS:160047

RH126161 (e-PCR)
- UniSTS:162872

AB019001 (e-PCR)
- UniSTS:163489

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in cholesterol metabolic process	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in cytoplasm	ISA Inferred from Sequence Alignment more info	PubMed
is_active_in extracellular space	IBA Inferred from Biological aspect of Ancestor more info
located_in extracellular space	ISA Inferred from Sequence Alignment more info	PubMed

General protein information

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Preferred Names: apolipoprotein N

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.