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    Mt2 metallothionein 2 [ Mus musculus (house mouse) ]

    Gene ID: 17750, updated on 27-Nov-2024

    Summary

    Official Symbol
    Mt2provided by MGI
    Official Full Name
    metallothionein 2provided by MGI
    Primary source
    MGI:MGI:97172
    See related
    Ensembl:ENSMUSG00000031762 AllianceGenome:MGI:97172
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Mt-2; MT-II
    Summary
    Predicted to enable cadmium ion binding activity and zinc ion binding activity. Acts upstream of or within several processes, including detoxification of copper ion; intracellular zinc ion homeostasis; and nitric oxide mediated signal transduction. Predicted to be located in cytosol. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including gut; liver lobe; lung; sensory organ; and telencephalon. Human ortholog(s) of this gene implicated in carotid stenosis and type 2 diabetes mellitus. Orthologous to several human genes including MT2A (metallothionein 2A). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in liver E14.5 (RPKM 757.6), liver E14 (RPKM 674.1) and 7 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Mt2 in Genome Data Viewer
    Location:
    8 C5; 8 46.32 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (94899246..94900195)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (94172618..94173567)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene metallothionein 3 Neighboring gene predicted gene, 39227 Neighboring gene metallothionein 1 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:96707225-96707334 Neighboring gene uncharacterized LOC118567560

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (2)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables cadmium ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables metal ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables zinc ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables zinc ion binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables zinc ion binding TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to cadmium ion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cellular response to copper ion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cellular response to zinc ion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cellular response to zinc ion ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in detoxification of copper ion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within detoxification of copper ion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in intracellular zinc ion homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within intracellular zinc ion homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of growth ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within nitric oxide mediated signal transduction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within response to bacterium IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in cytosol TAS
    Traceable Author Statement
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    metallothionein-2
    Names
    metallothionein-II

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_008630.2NP_032656.1  metallothionein-2

      See identical proteins and their annotated locations for NP_032656.1

      Status: VALIDATED

      Source sequence(s)
      AK002567, AV014447, BY159747
      Consensus CDS
      CCDS40437.1
      UniProtKB/Swiss-Prot
      P02798
      UniProtKB/TrEMBL
      Q6VEU6
      Related
      ENSMUSP00000034214.7, ENSMUST00000034214.8
      Conserved Domains (1) summary
      pfam00131
      Location:461
      Metallothio; Metallothionein

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      94899246..94900195
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)