Apol7a apolipoprotein L7A [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Apol7aprovided by RGD
Official Full Name: apolipoprotein L7Aprovided by RGD
Primary source: RGD:6496055
See related: AllianceGenome:RGD:6496055
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Predicted to enable lipid binding activity. Predicted to be involved in lipid transport and lipoprotein metabolic process. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
Annotation information: not in current annotation release
Expression: Biased expression in Heart (RPKM 304.9), Liver (RPKM 173.2) and 9 other tissues See more
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Genomic context

Location:: 7q34

Annotation release	Status	Assembly	Chr	Location
106	latest, but not current	Rnor_6.0 (GCF_000001895.5)	7	NC_005106.4 (118472489..118474895, complement)
106	latest, but not current	Rn_Celera (GCF_000002265.2)	7	AC_000075.1 (105478505..105497185, complement)

Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Markers

RH137445 (e-PCR)
- UniSTS:219533

D7Rat59 (e-PCR)
- UniSTS:240312

RH127868 (e-PCR)
- UniSTS:211178

Readthrough Apol9a-Apol7a

Readthrough gene: Apol9a-Apol7a, Included gene: Apol9a

Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables lipid binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in lipid transport	IEA Inferred from Electronic Annotation more info
involved_in lipoprotein metabolic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in extracellular region	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: apolipoprotein L3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001429360.1 → NP_001416289.1 apolipoprotein L3-like isoform 1

Status: VALIDATED

Source sequence(s)

JAXUCZ010000007

UniProtKB/TrEMBL

A0A8I5ZZ37, A0A8I6GFU1
NM_001429361.1 → NP_001416290.1 apolipoprotein L3-like isoform 1

Status: VALIDATED

Source sequence(s)

JAXUCZ010000007

UniProtKB/TrEMBL

A0A8I5ZZ37, A0A8I6GFU1
NM_001429362.1 → NP_001416291.1 apolipoprotein L3-like isoform 2

Status: VALIDATED

Source sequence(s)

JAXUCZ010000007

UniProtKB/TrEMBL

A0A8I6GFU1
NM_001429363.1 → NP_001416292.1 apolipoprotein L3-like isoform 3

Status: VALIDATED

Source sequence(s)

JAXUCZ010000007