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    PEX29 Pex29p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 852090, updated on 9-Dec-2024

    Summary

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    Official Symbol
    PEX29
    Official Full Name
    Pex29p
    Primary source
    SGD:S000002887
    Locus tag
    YDR479C
    See related
    AllianceGenome:SGD:S000002887; FungiDB:YDR479C; VEuPathDB:YDR479C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Involved in ER-dependent peroxisome organization. Located in endoplasmic reticulum and peroxisomal membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See PEX29 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    1
    Sequence:
    Chromosome: IV; NC_001136.10 (1415210..1416874, complement)

    Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene AMP-activated serine/threonine-protein kinase catalytic subunit SNF1 Neighboring gene Snm1p Neighboring gene Dig2p Neighboring gene alkaline phosphatase PHO8

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001136.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Ubiquitin chain elongation enzyme Ufd2 regulates a subset of Doa10 substrates. Liu C, et al. J Biol Chem, 2010 Apr 2. PMID 20159987, Free PMC Article
    2. YHR150w and YDR479c encode peroxisomal integral membrane proteins involved in the regulation of peroxisome number, size, and distribution in Saccharomyces cerevisiae. Vizeacoumar FJ, et al. J Cell Biol, 2003 Apr 28. PMID 12707309, Free PMC Article
    3. Pex30-like proteins function as adaptors at distinct ER membrane contact sites. Ferreira JV, et al. J Cell Biol, 2021 Oct 4. PMID 34402813, Free PMC Article
    4. Pex30p, Pex31p, and Pex32p form a family of peroxisomal integral membrane proteins regulating peroxisome size and number in Saccharomyces cerevisiae. Vizeacoumar FJ, et al. Mol Biol Cell, 2004 Feb. PMID 14617799, Free PMC Article
    5. Cytoplasmic Control of Sense-Antisense mRNA Pairs. Sinturel F, et al. Cell Rep, 2015 Sep 22. PMID 26344770

    See all (33) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in ER-dependent peroxisome organization IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in peroxisome organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in peroxisome organization IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in peroxisome organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in peroxisome organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum HDA PubMed 
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in peroxisomal membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in peroxisomal membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in peroxisomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in peroxisome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Pex29p
    NP_010767.1
    • ER-resident protein involved in peroxisomal biogenesis; ER-localized protein that associates with peroxisomes; interacts with Pex30p and reticulons Rtn1p and Yop1p to regulate peroxisome biogenesis from the ER; role in peroxisomal-destined vesicular flow from the ER; regulates peroxisomal size, number and distribution; Pex28p and Pex29p may act at steps upstream of those mediated by Pex30p, Pex31p, and Pex32p; forms ER foci upon DNA replication stress

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001136.10 Reference assembly

      Range
      1415210..1416874 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001180787.1 → NP_010767.1  TPA: Pex29p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_010767.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VTA2, Q03370
      UniProtKB/TrEMBL
      A6ZZ68, B3LFI7, B5VH07, C7GKR8, C8Z637, N1P904
      Conserved Domains (1) summary
      pfam06398
      Location:115 → 465
      Pex24p; Integral peroxisomal membrane peroxin
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q03370.1

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