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    ldtA L,D-transpeptidase LdtA [ Mycobacterium tuberculosis H37Rv ]

    Gene ID: 886900, updated on 6-Oct-2023

    Summary

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    Gene symbol
    ldtA
    Gene description
    L,D-transpeptidase LdtA
    Locus tag
    Rv0116c
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
    Lineage
    Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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    Genomic context

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    Sequence:
    NC_000962.3 (140267..141022, complement)

    NC_000962.3Genomic Context describing neighboring genes Neighboring gene D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase Neighboring gene D-alpha-D-heptose-7-phosphate kinase HddA Neighboring gene hypothetical protein Neighboring gene oxidative stress response regulatory protein OxyS Neighboring gene oxalyl-CoA decarboxylase OxcA Neighboring gene fatty-acid--CoA ligase FadD7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000962.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure of LdtMt2, an L,D-transpeptidase from Mycobacterium tuberculosis. Böth D, et al. Acta Crystallogr D Biol Crystallogr, 2013 Mar. PMID 23519418, Free PMC Article
    2. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
    3. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
    4. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    General protein information

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    Preferred Names
    L,D-transpeptidase LdtA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000962.3 Reference assembly

      Range
      140267..141022 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_214630.1 L,D-transpeptidase LdtA [Mycobacterium tuberculosis H37Rv]

      See identical proteins and their annotated locations for NP_214630.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2I7W2J2
      Conserved Domains (1) summary
      COG1376
      Location:15 → 251
      ErfK; Lipoprotein-anchoring transpeptidase ErfK/SrfK [Cell wall/membrane/envelope biogenesis]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O53638.1

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