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    vapB28 antitoxin VapB28 [ Mycobacterium tuberculosis H37Rv ]

    Gene ID: 887895, updated on 6-Oct-2023

    Summary

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    Gene symbol
    vapB28
    Gene description
    antitoxin VapB28
    Locus tag
    Rv0608
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
    Lineage
    Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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    Genomic context

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    Sequence:
    NC_000962.3 (703244..703489)

    NC_000962.3Genomic Context describing neighboring genes Neighboring gene IS1536 family serine type transposase Neighboring gene hypothetical protein Neighboring gene ribonuclease VapC28 Neighboring gene hypothetical protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000962.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
    2. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
    3. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    antitoxin VapB28
    NP_215122.1
    • part of toxin-antitoxin (TA) operon with Rv0609. This region is a possible MT-complex-specific genomic island (See Becq et al., 2007 PMID:17545187).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000962.3 Reference assembly

      Range
      703244..703489
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_215122.1 antitoxin VapB28 [Mycobacterium tuberculosis H37Rv]

      See identical proteins and their annotated locations for NP_215122.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      R4M4A7
      Conserved Domains (1) summary
      COG4423
      Location:1 → 80
      COG4423; Uncharacterized protein [Function unknown]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P9WJ39.1

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