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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001322340.2 → NP_001309269.2 ATP-dependent DNA helicase DDX31 isoform 3
Status: REVIEWED
- Source sequence(s)
-
AL160165, AL354735
- UniProtKB/TrEMBL
-
B4DYZ1
- Conserved Domains (2) summary
-
- PRK01297
Location:21 → 507
- PRK01297; ATP-dependent RNA helicase RhlB; Provisional
- cd17949
Location:136 → 339
- DEADc_DDX31; DEAD-box helicase domain of DEAD box protein 31
-
NM_001322341.2 → NP_001309270.1 ATP-dependent DNA helicase DDX31 isoform 4
Status: REVIEWED
- Source sequence(s)
-
AL160165, AL354735
- UniProtKB/TrEMBL
-
B4DYZ1
- Conserved Domains (4) summary
-
- PRK01297
Location:37 → 570
- PRK01297; ATP-dependent RNA helicase RhlB; Provisional
- cd00268
Location:136 → 348
- DEADc; DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif ...
- pfam00271
Location:405 → 527
- Helicase_C; Helicase conserved C-terminal domain
- pfam13959
Location:597 → 658
- DUF4217; Domain of unknown function (DUF4217)
-
NM_001322342.1 → NP_001309271.1 ATP-dependent DNA helicase DDX31 isoform 5
Status: REVIEWED
- Source sequence(s)
-
AL160165, AL354735
- UniProtKB/TrEMBL
-
B4DYZ1
- Conserved Domains (4) summary
-
- smart00487
Location:77 → 274
- DEXDc; DEAD-like helicases superfamily
- cd00268
Location:55 → 267
- DEADc; DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif ...
- pfam00271
Location:324 → 446
- Helicase_C; Helicase conserved C-terminal domain
- pfam13959
Location:516 → 577
- DUF4217; Domain of unknown function (DUF4217)
-
NM_001322343.1 → NP_001309272.1 ATP-dependent DNA helicase DDX31 isoform 6
Status: REVIEWED
- Source sequence(s)
-
AL160165, AL354735
- UniProtKB/TrEMBL
-
B4DYZ1
- Conserved Domains (4) summary
-
- PRK01297
Location:1 → 537
- PRK01297; ATP-dependent RNA helicase RhlB; Provisional
- cd00268
Location:103 → 315
- DEADc; DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif ...
- pfam00271
Location:372 → 494
- Helicase_C; Helicase conserved C-terminal domain
- pfam13959
Location:564 → 625
- DUF4217; Domain of unknown function (DUF4217)
-
NM_001322344.2 → NP_001309273.2 ATP-dependent DNA helicase DDX31 isoform 7
Status: REVIEWED
- Source sequence(s)
-
AL160165
- Consensus CDS
-
CCDS83433.2
- Related
- ENSP00000479697.2, ENST00000480876.3
- Conserved Domains (2) summary
-
- PRK01297
Location:28 → 189
- PRK01297; ATP-dependent RNA helicase RhlB; Provisional
- cl28899
Location:136 → 196
- DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
-
NM_022779.9 → NP_073616.7 ATP-dependent DNA helicase DDX31 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AL160165, AL354735
- Consensus CDS
-
CCDS6951.2
- UniProtKB/TrEMBL
-
B4DYZ1
- Related
- ENSP00000361232.4, ENST00000372159.8
- Conserved Domains (3) summary
-
- COG0513
Location:123 → 617
- SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
- cd17949
Location:136 → 339
- DEADc_DDX31; DEAD-box helicase domain of DEAD box protein 31
- pfam13959
Location:589 → 649
- DUF4217; Domain of unknown function (DUF4217)
-
NM_138620.2 → NP_619526.2 ATP-dependent DNA helicase DDX31 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) has a shorter and alternate 3' region, as compared to variant 1. Since the first 3 nt of the alternate region is just an in-frame translation stop codon, this variant encodes a C-terminal truncated isoform (2) compared to isoform 1.
- Source sequence(s)
-
AL160165
- Consensus CDS
-
CCDS6952.2
- UniProtKB/TrEMBL
-
A0AAK2PNZ4
- Related
- ENSP00000310539.2, ENST00000310532.7
- Conserved Domains (2) summary
-
- cd17949
Location:136 → 339
- DEADc_DDX31; DEAD-box helicase domain of DEAD box protein 31
- cl38915
Location:376 → 480
- DEAD-like_helicase_C; C-terminal helicase domain of the DEAD-like helicases
RNA
-
NR_136309.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL160165, AL354735