NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001284220.2 → NP_001271149.1 elongator complex protein 3 isoform 2
See identical proteins and their annotated locations for NP_001271149.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and lacks an in-frame portion of the 5' coding region, compared to variant 1. These differences cause translation initiation at a downstream AUG and result in an isoform (2) with a shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AC019031, AC021678, AK296475, BU683531
- Consensus CDS
-
CCDS75718.1
- UniProtKB/TrEMBL
- B4DKA4, B4DPB7
- Related
- ENSP00000429180.1, ENST00000524103.5
- Conserved Domains (3) summary
-
- cd01335
Location:24 → 268
- Radical_SAM; Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. ...
- COG1243
Location:1 → 474
- ELP3; Histone acetyltransferase, component of the RNA polymerase elongator complex [Transcription, Chromatin structure and dynamics]
- pfam16199
Location:242 → 320
- Radical_SAM_C; Radical_SAM C-terminal domain
-
NM_001284222.2 → NP_001271151.1 elongator complex protein 3 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) contains a distinct 5' UTR and lacks an in-frame portion of the 5' coding region, compared to variant 1. These differences cause translation initiation at a downstream AUG and result in an isoform (3) with a shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AC019031, AC021678, BU683531, BX648011, DA877844
- Consensus CDS
-
CCDS75717.1
- UniProtKB/TrEMBL
-
B4DPB7
- Related
- ENSP00000428449.1, ENST00000521015.5
- Conserved Domains (1) summary
-
- cl25699
Location:22 → 532
- Radical_SAM_C; Radical_SAM C-terminal domain
-
NM_001284224.2 → NP_001271153.1 elongator complex protein 3 isoform 4
See identical proteins and their annotated locations for NP_001271153.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and lacks a portion of the 5' coding region, compared to variant 1. These differences cause translation initiation at a downstream AUG and result in an isoform (4) with a shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AC019031, AC021678, AK302140, BU683531
- Consensus CDS
-
CCDS64861.1
- UniProtKB/TrEMBL
-
B4DXV1
- Conserved Domains (1) summary
-
- COG1243
Location:13 → 427
- ELP3; Histone acetyltransferase, component of the RNA polymerase elongator complex [Transcription, Chromatin structure and dynamics]
-
NM_001284225.2 → NP_001271154.1 elongator complex protein 3 isoform 4
See identical proteins and their annotated locations for NP_001271154.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR and lacks a portion of the 5' coding region, compared to variant 1. These differences cause translation initiation at a downstream AUG and result in an isoform (4) with a shorter N-terminus, compared to isoform 1. Variants 4 and 5 encode the same isoform (5).
- Source sequence(s)
-
AC019031, AC021678, AK293424, BU683531
- Consensus CDS
-
CCDS64861.1
- UniProtKB/TrEMBL
-
B4DXV1
- Related
- ENSP00000445558.1, ENST00000537665.2
- Conserved Domains (1) summary
-
- COG1243
Location:13 → 427
- ELP3; Histone acetyltransferase, component of the RNA polymerase elongator complex [Transcription, Chromatin structure and dynamics]
-
NM_001284226.2 → NP_001271155.1 elongator complex protein 3 isoform 5
See identical proteins and their annotated locations for NP_001271155.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR and lacks a portion of the 5' coding region, compared to variant 1. These differences cause translation initiation at a downstream AUG and result in an isoform (6) with a shorter N-terminus, compared to isoform 1
- Source sequence(s)
-
AC021678, AK295574, BU683531
- Consensus CDS
-
CCDS64860.1
- UniProtKB/TrEMBL
-
B4DPB7
- Related
- ENSP00000369711.4, ENST00000380353.8
- Conserved Domains (1) summary
-
- cl25699
Location:1 → 454
- Radical_SAM_C; Radical_SAM C-terminal domain
-
NM_018091.6 → NP_060561.3 elongator complex protein 3 isoform 1
See identical proteins and their annotated locations for NP_060561.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AL834273, BM663362, DA150994
- Consensus CDS
-
CCDS6065.1
- UniProtKB/Swiss-Prot
- B4DE19, B4DIG1, E2QRI5, Q53G84, Q6AWB0, Q9BVF7, Q9H9T3, Q9NVZ1
- UniProtKB/TrEMBL
-
B4DPB7
- Related
- ENSP00000256398.8, ENST00000256398.13
- Conserved Domains (1) summary
-
- TIGR01211
Location:36 → 546
- ELP3; radical SAM enzyme/protein acetyltransferase, ELP3 family
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000008.11 Reference GRCh38.p14 Primary Assembly
- Range
-
28090232..28191153
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_024447184.2 → XP_024302952.1 elongator complex protein 3 isoform X1
- UniProtKB/TrEMBL
-
B4DPB7
- Conserved Domains (1) summary
-
- cl25699
Location:22 → 532
- Radical_SAM_C; Radical_SAM C-terminal domain
Alternate T2T-CHM13v2.0
Genomic
-
NC_060932.1 Alternate T2T-CHM13v2.0
- Range
-
28368442..28469343
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054360749.1 → XP_054216724.1 elongator complex protein 3 isoform X1
- UniProtKB/TrEMBL
-
B4DPB7