Igkv3-4 immunoglobulin kappa variable 3-4 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Igkv3-4provided by MGI
Official Full Name: immunoglobulin kappa variable 3-4provided by MGI
Primary source: MGI:MGI:1330855
See related: Ensembl:ENSMUSG00000096715 IMGT/GENE-DB:IGKV3-4; AllianceGenome:MGI:1330855
Gene type: other
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Igk-V21-4
Summary: Predicted to be involved in immune response. Predicted to be located in extracellular space. Predicted to be part of monomeric IgA immunoglobulin complex; pentameric IgM immunoglobulin complex; and secretory IgA immunoglobulin complex. Orthologous to several human genes including IGKV3-11 (immunoglobulin kappa variable 3-11); IGKV3-15 (immunoglobulin kappa variable 3-15); and IGKV3-20 (immunoglobulin kappa variable 3-20). [provided by Alliance of Genome Resources, Dec 2024]
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: 6 C1; 6 32.01 cM

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	6	NC_000072.7 (70648773..70649361)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	6	NC_000072.6 (70671789..70672377)

Chromosome 6 - NC_000072.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Interactions

Go to the top of the page Help

Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

Go to the top of the page Help

Markers

RH127636 (e-PCR)
- UniSTS:210946

Z72374 (e-PCR)
- UniSTS:46172

Igk-C (e-PCR), detects polymorphism
- UniSTS:143506

AV061724 (e-PCR)
- UniSTS:179389

Other Names

V kappa 21-4
immunoglobulin kappa chain variable 21 (V21)-4
immunoglobulin kappa chain variable 3-4
immunoglobulin kappa light chain
monoclonal antibody kappa light chain

Gene Ontology Provided by MGI

Process	Evidence Code	Pubs
involved_in immune response	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in extracellular space	ISO Inferred from Sequence Orthology more info
part_of immunoglobulin complex	IBA Inferred from Biological aspect of Ancestor more info
part_of monomeric IgA immunoglobulin complex	ISO Inferred from Sequence Orthology more info
part_of pentameric IgM immunoglobulin complex	ISO Inferred from Sequence Orthology more info
part_of secretory IgA immunoglobulin complex	ISO Inferred from Sequence Orthology more info

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.