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    dnj-22 J domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 179227, updated on 2-Nov-2024

    Summary

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    Official Symbol
    dnj-22
    Official Full Name
    J domain-containing protein
    Primary source
    WormBase:WBGene00001040
    Locus tag
    CELE_T23B12.7
    See related
    AllianceGenome:WB:WBGene00001040
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in spliceosomal complex disassembly. Predicted to be part of spliceosomal complex. Orthologous to human DNAJC17 (DnaJ heat shock protein family (Hsp40) member C17). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See dnj-22 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    2
    Sequence:
    Chromosome: V; NC_003283.11 (8461113..8462120, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene TransThyretin-Related family domain Neighboring gene ncRNA Neighboring gene BTB domain-containing protein Neighboring gene Protein MAK10 homolog Neighboring gene 28S ribosomal protein S2, mitochondrial Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A targeted RNAi screen for genes involved in chromosome morphogenesis and nuclear organization in the Caenorhabditis elegans germline. Colaiácovo MP, et al. Genetics, 2002 Sep. PMID 12242227, Free PMC Article
    2. Identification of conserved pathways of DNA-damage response and radiation protection by genome-wide RNAi. van Haaften G, et al. Curr Biol, 2006 Jul 11. PMID 16824923
    3. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    4. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
    5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in spliceosomal complex disassembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of spliceosomal complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    J domain-containing protein
    NP_505178.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      8461113..8462120 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_072777.5 → NP_505178.1  J domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      O17002
      Conserved Domains (3) summary
      PRK12704
      Location:46 → 178
      PRK12704; phosphodiesterase; Provisional
      cd12429
      Location:181 → 254
      RRM_DNAJC17; RNA recognition motif in the DnaJ homolog subfamily C member 17
      pfam00226
      Location:8 → 71
      DnaJ; DnaJ domain
    Nucleotide Protein
    Heading Accession and Version

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