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    gmap-2 GM2 Activator Protein family member [ Caenorhabditis elegans ]

    Gene ID: 181427, updated on 9-Dec-2024

    Summary

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    Official Symbol
    gmap-2
    Official Full Name
    GM2 Activator Protein family member
    Primary source
    WormBase:WBGene00007343
    Locus tag
    CELE_C05E7.1
    See related
    AllianceGenome:WB:WBGene00007343
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in excretory pore; rectal epithelium; seam cell; and vulval cell. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See gmap-2 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    7
    Sequence:
    Chromosome: X; NC_003284.9 (12941442..12943266, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene tRNA-Gln Neighboring gene GM2 Activator Protein family member Neighboring gene tRNA-Leu Neighboring gene Neuropeptide-Like Protein Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene 1-phosphatidylinositol-3-phosphate 5-kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A lipid transfer protein ensures nematode cuticular impermeability. Njume FN, et al. iScience, 2022 Nov 18. PMID 36339267, Free PMC Article
    2. Screening for cold tolerance genes in C. elegans, whose expressions are affected by anticancer drugs camptothecin and leptomycin B. Okahata M, et al. Sci Rep, 2024 Mar 5. PMID 38443452, Free PMC Article
    3. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    GM2 Activator Protein family member
    NP_001359613.1
    • Confirmed by transcript evidence;
      Product from WormBase gene class gmap

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      12941442..12943266 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001373544.3 → NP_001359613.1  GM2 Activator Protein family member [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U3R5
    Nucleotide Protein
    Heading Accession and Version

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