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    Y53F4B.12 Amino acid permease/ SLC12A domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 190214, updated on 4-Jan-2025

    Summary

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    Official Symbol
    Y53F4B.12
    Official Full Name
    Amino acid permease/ SLC12A domain-containing protein
    Primary source
    WormBase:WBGene00013159
    Locus tag
    CELE_Y53F4B.12
    See related
    AllianceGenome:WB:WBGene00013159
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable amino acid transmembrane transporter activity. Predicted to be involved in amino acid transport. Predicted to be located in membrane. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Jan 2025]
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    Genomic context

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    See Y53F4B.12 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    13
    Sequence:
    Chromosome: II; NC_003280.10 (15019223..15025782)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene AAA+ ATPase domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables amino acid transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in L-arginine transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in L-lysine transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in amino acid transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Amino acid permease/ SLC12A domain-containing protein
    NP_001293550.1
    • Confirmed by transcript evidence
    NP_497097.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      15019223..15025782
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_064696.5 → NP_497097.1  Amino acid permease/ SLC12A domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_497097.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9NAB9
      Conserved Domains (1) summary
      TIGR00906
      Location:3 → 366
      2A0303; cationic amino acid transport permease

    2. NM_001306621.3 → NP_001293550.1  Amino acid permease/ SLC12A domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293550.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      U4PLX3
      Conserved Domains (1) summary
      TIGR00906
      Location:3 → 407
      2A0303; cationic amino acid transport permease
    Nucleotide Protein
    Heading Accession and Version

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