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    ate-1 ATE_N domain-containing protein;Arginyl-tRNA--protein transferase 1 [ Caenorhabditis elegans ]

    Gene ID: 172800, updated on 9-Dec-2024

    Summary

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    Official Symbol
    ate-1
    Official Full Name
    ATE_N domain-containing protein;Arginyl-tRNA--protein transferase 1
    Primary source
    WormBase:WBGene00010615
    Locus tag
    CELE_K07A1.9
    See related
    AllianceGenome:WB:WBGene00010615
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable arginyl-tRNA--protein transferase activity. Predicted to be involved in proteasomal protein catabolic process. Predicted to be active in cytoplasm. Orthologous to human ATE1 (arginyltransferase 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See ate-1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    9
    Sequence:
    Chromosome: I; NC_003279.8 (9611813..9615082, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Aquaporin Neighboring gene Sm domain-containing protein Neighboring gene L-type lectin-like domain-containing protein Neighboring gene Large ribosomal subunit protein mL64 Neighboring gene putative histone-binding protein rba-1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Coupled Caspase and N-End Rule Ligase Activities Allow Recognition and Degradation of Pluripotency Factor LIN-28 during Non-Apoptotic Development. Weaver BP, et al. Dev Cell, 2017 Jun 19. PMID 28602583, Free PMC Article
    2. Defect-buffering cellular plasticity increases robustness of metazoan embryogenesis. Xiao L, et al. Cell Syst, 2022 Aug 17. PMID 35882226
    3. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    4. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    5. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables arginyl-tRNA--protein transferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables arginyl-tRNA--protein transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in proteasomal protein catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in protein arginylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    ATE_N domain-containing protein;Arginyl-tRNA--protein transferase 1
    NP_001335527.1
    • Confirmed by transcript evidence
    NP_001335528.1
    • Confirmed by transcript evidence
    NP_001335529.1
    • Confirmed by transcript evidence
    NP_001359652.1
    • Confirmed by transcript evidence
    NP_492549.2
    • Confirmed by transcript evidence
    NP_871829.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      9611813..9615082 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001348617.2 → NP_001335527.1  Arginyl-tRNA--protein transferase 1 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1N7SZF7
      Conserved Domains (2) summary
      pfam04376
      Location:15 → 119
      ATE_N; Arginine-tRNA-protein transferase, N terminus
      pfam04377
      Location:253 → 387
      ATE_C; Arginine-tRNA-protein transferase, C terminus

    2. NM_182029.4 → NP_871829.1  Arginyl-tRNA--protein transferase 1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_871829.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8I4H6
      Conserved Domains (3) summary
      PRK01305
      Location:1 → 372
      PRK01305; arginyl-tRNA-protein transferase; Provisional
      pfam04376
      Location:14 → 92
      ATE_N; Arginine-tRNA-protein transferase, N terminus
      pfam04377
      Location:226 → 362
      ATE_C; Arginine-tRNA-protein transferase, C terminus

    3. NM_060148.8 → NP_492549.2  Arginyl-tRNA--protein transferase 1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_492549.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      P90914
      Conserved Domains (2) summary
      pfam04376
      Location:14 → 120
      ATE_N; Arginine-tRNA-protein transferase, N terminus
      pfam04377
      Location:254 → 390
      ATE_C; Arginine-tRNA-protein transferase, C terminus

    4. NM_001373508.1 → NP_001359652.1  ATE_N domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8I4H5

    5. NM_001348618.3 → NP_001335528.1  Arginyl-tRNA--protein transferase 1 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1N7SYV6
      Conserved Domains (2) summary
      pfam04377
      Location:179 → 313
      ATE_C; Arginine-tRNA-protein transferase, C terminus
      cl27166
      Location:5 → 45
      ATE_N; Arginine-tRNA-protein transferase, N terminus

    6. NM_001348619.3 → NP_001335529.1  Arginyl-tRNA--protein transferase 1 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1N7SYQ3
      Conserved Domains (2) summary
      pfam04376
      Location:1 → 51
      ATE_N; Arginine-tRNA-protein transferase, N terminus
      pfam04377
      Location:185 → 319
      ATE_C; Arginine-tRNA-protein transferase, C terminus
    Nucleotide Protein
    Heading Accession and Version

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