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    T02C1.1 putative RING finger protein T02C1.1 [ Caenorhabditis elegans ]

    Gene ID: 176305, updated on 9-Dec-2024

    Summary

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    Official Symbol
    T02C1.1
    Official Full Name
    putative RING finger protein T02C1.1
    Primary source
    WormBase:WBGene00011365
    Locus tag
    CELE_T02C1.1
    See related
    AllianceGenome:WB:WBGene00011365
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable metal ion binding activity; single-stranded DNA binding activity; and ubiquitin protein ligase activity. Predicted to be involved in postreplication repair and protein monoubiquitination. Orthologous to human LONRF3 (LON peptidase N-terminal domain and ring finger 3). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See T02C1.1 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    4
    Sequence:
    Chromosome: III; NC_003281.10 (9247525..9248618)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Sodium-dependent dopamine transporter Neighboring gene RING-type E3 ubiquitin transferase Neighboring gene Uncharacterized protein Neighboring gene CAP-Gly domain-containing linker protein 1 homolog

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Interactions within the ubiquitin pathway of Caenorhabditis elegans. Gudgen M, et al. Biochem Biophys Res Commun, 2004 Dec 10. PMID 15530417
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables single-stranded DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in postreplication repair IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in protein monoubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative RING finger protein T02C1.1
    NP_499044.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      9247525..9248618
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_066643.5 → NP_499044.1  putative RING finger protein T02C1.1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_499044.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q03605
      Conserved Domains (1) summary
      pfam00097
      Location:8 → 45
      zf-C3HC4; Zinc finger, C3HC4 type (RING finger)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q03605.1

    Gene LinkOut

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