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    • Showing Current items.

    spig-1 Secreted protein [ Caenorhabditis elegans ]

    Gene ID: 179090, updated on 18-Sep-2024

    Summary

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    Official Symbol
    spig-1
    Official Full Name
    Secreted protein
    Primary source
    WormBase:WBGene00017613
    Locus tag
    CELE_F20A1.1
    See related
    AllianceGenome:WB:WBGene00017613
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See spig-1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    2
    Sequence:
    Chromosome: V; NC_003283.11 (7051715..7052179)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene Secreted protein Neighboring gene Schlafen-like protein 2 Neighboring gene transcellular chaperone signaling (x)cross tissue Neighboring gene DUF148 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TENT5 cytoplasmic noncanonical poly(A) polymerases regulate the innate immune response in animals. Liudkovska V, et al. Sci Adv, 2022 Nov 18. PMID 36383655, Free PMC Article
    2. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    3. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Secreted protein
    NP_504787.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      7051715..7052179
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_072386.8 → NP_504787.1  Secreted protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_504787.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q19615
      Conserved Domains (1) summary
      pfam14747
      Location:21 → 96
      DUF4473; Domain of unknown function (DUF4473)
    Nucleotide Protein
    Heading Accession and Version

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