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    C30H6.5 Apple domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 183068, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C30H6.5
    Official Full Name
    Apple domain-containing protein
    Primary source
    WormBase:WBGene00007823
    Locus tag
    CELE_C30H6.5
    See related
    AllianceGenome:WB:WBGene00007823
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in anatomical structure morphogenesis. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C30H6.5 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    11
    Sequence:
    Chromosome: IV; NC_003282.8 (17371769..17375703)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene HAlF transporter (PGP related) Neighboring gene Altered inheritance of mitochondria protein 36, mitochondrial Neighboring gene 2-oxoacid dehydrogenase acyltransferase catalytic domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in anatomical structure morphogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Apple domain-containing protein
    NP_001255948.1
    • Partially confirmed by transcript evidence
    NP_001255949.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      17371769..17375703
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001269020.3 → NP_001255949.1  Apple domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255949.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O45277
      Conserved Domains (2) summary
      smart00473
      Location:419 → 485
      PAN_AP; divergent subfamily of APPLE domains
      cd01099
      Location:320 → 397
      PAN_AP_HGF; Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen/hepatocyte growth factor proteins, and various proteins found in Bilateria, such as leech anti-platelet proteins. PAN/APPLE domains fulfill diverse biological functions ...

    2. NM_001269019.3 → NP_001255948.1  Apple domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255948.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2Z5
      Conserved Domains (2) summary
      smart00473
      Location:422 → 488
      PAN_AP; divergent subfamily of APPLE domains
      cd01099
      Location:323 → 400
      PAN_AP_HGF; Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen/hepatocyte growth factor proteins, and various proteins found in Bilateria, such as leech anti-platelet proteins. PAN/APPLE domains fulfill diverse biological functions ...
    Nucleotide Protein
    Heading Accession and Version

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