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    T16A9.3 BTB domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 188549, updated on 18-Sep-2024

    Summary

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    Official Symbol
    T16A9.3
    Official Full Name
    BTB domain-containing protein
    Primary source
    WormBase:WBGene00011793
    Locus tag
    CELE_T16A9.3
    See related
    AllianceGenome:WB:WBGene00011793
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See T16A9.3 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    8
    Sequence:
    Chromosome: V; NC_003283.11 (14205514..14209010)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene INTegrator complex Subunit homolog Neighboring gene Stress activated transcription factor atfs-1 Neighboring gene Seven TM Receptor Neighboring gene Membrane transporter protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    BTB domain-containing protein
    NP_506517.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      14205514..14209010
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_074116.4 → NP_506517.3  BTB domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_506517.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q22522
      Conserved Domains (3) summary
      COG5630
      Location:37 → 182
      Arg2; Acetylglutamate synthase [Amino acid transport and metabolism]
      pfam06887
      Location:247 → 293
      DUF1265; Protein of unknown function (DUF1265)
      cl38908
      Location:156 → 249
      BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    Nucleotide Protein
    Heading Accession and Version

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