U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    spp-16 Saposin B-type domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 185207, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    spp-16
    Official Full Name
    Saposin B-type domain-containing protein
    Primary source
    WormBase:WBGene00005001
    Locus tag
    CELE_F32D8.9
    See related
    AllianceGenome:WB:WBGene00005001
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See spp-16 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    3
    Sequence:
    Chromosome: V; NC_003283.11 (10900531..10901303, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Transmembrane protein 70 homolog, mitochondrial Neighboring gene Phosphomevalonate kinase Neighboring gene Protein transport protein Sec61 subunit gamma Neighboring gene BPTI/Kunitz inhibitor domain-containing protein Neighboring gene Methyltransferase type 11 domain-containing protein Neighboring gene Anti-sigma factor Neighboring gene ncRNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Responses to infection and possible recognition strategies in the innate immune system of Caenorhabditis elegans. Nicholas HR, et al. Mol Immunol, 2004 Jul. PMID 15183927
    2. Transcriptomics of ivermectin response in Caenorhabditis elegans: Integrating abamectin quantitative trait loci and comparison to the Ivermectin-exposed DA1316 strain. Dube F, et al. PLoS One, 2023. PMID 37141255, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    Saposin B-type domain-containing protein
    NP_505780.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      10900531..10901303 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_073379.8 → NP_505780.1  Saposin B-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_505780.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q19968
      Conserved Domains (1) summary
      smart00741
      Location:22 → 101
      SapB; Saposin (B) Domains
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools