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    F11A10.6 Transmembrane protein 115 [ Caenorhabditis elegans ]

    Gene ID: 178149, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F11A10.6
    Official Full Name
    Transmembrane protein 115
    Primary source
    WormBase:WBGene00008687
    Locus tag
    CELE_F11A10.6
    See related
    AllianceGenome:WB:WBGene00008687
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum. Predicted to be located in membrane. Predicted to be active in Golgi apparatus. Orthologous to human TMEM115 (transmembrane protein 115). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F11A10.6 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    6
    Sequence:
    Chromosome: IV; NC_003282.8 (12087021..12089027, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Matrin-type domain-containing protein Neighboring gene RRM domain-containing protein Neighboring gene ncRNA Neighboring gene Polycomb group RING finger protein 3 homolog mig-32 Neighboring gene Cleavage and polyadenylation specificity factor subunit 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Transmembrane protein 115
    NP_001255618.1
    • Confirmed by transcript evidence
    NP_001255619.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      12087021..12089027 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001268689.5 → NP_001255618.1  Transmembrane protein 115 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255618.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U3K1

    2. NM_001268690.3 → NP_001255619.1  Transmembrane protein 115 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255619.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      E1B6R9
    Nucleotide Protein
    Heading Accession and Version

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