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    fbxa-152 F-box domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 181956, updated on 18-Sep-2024

    Summary

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    Official Symbol
    fbxa-152
    Official Full Name
    F-box domain-containing protein
    Primary source
    WormBase:WBGene00007166
    Locus tag
    CELE_B0391.11
    See related
    AllianceGenome:WB:WBGene00007166
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See fbxa-152 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    4
    Sequence:
    Chromosome: V; NC_003283.11 (15600307..15602353, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene VOC domain-containing protein Neighboring gene F-box domain-containing protein Neighboring gene F-box domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    F-box domain-containing protein
    NP_001263900.1
    • Confirmed by transcript evidence
    NP_506878.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      15600307..15602353 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_074477.3 → NP_506878.1  F-box domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_506878.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9NDU9
      Conserved Domains (3) summary
      smart00256
      Location:75 → 106
      FBOX; A Receptor for Ubiquitination Targets
      pfam01827
      Location:198 → 336
      FTH; FTH domain
      pfam17906
      Location:9 → 58
      HTH_48; HTH domain in Mos1 transposase

    2. NM_001276971.1 → NP_001263900.1  F-box domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001263900.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      J7SF91
      Conserved Domains (3) summary
      pfam01827
      Location:198 → 240
      FTH; FTH domain
      pfam17906
      Location:9 → 58
      HTH_48; HTH domain in Mos1 transposase
      cd22150
      Location:72 → 106
      F-box_CeFBXA-like; F-box domain found in Caenorhabditis elegans F-box domain-containing proteins (CeFBXA) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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