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    Y113G7B.12 Reverse transcriptase domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 190975, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y113G7B.12
    Official Full Name
    Reverse transcriptase domain-containing protein
    Primary source
    WormBase:WBGene00013762
    Locus tag
    CELE_Y113G7B.12
    See related
    AllianceGenome:WB:WBGene00013762
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable RNA-directed DNA polymerase activity. Predicted to be involved in RNA-templated DNA biosynthetic process. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y113G7B.12 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    4
    Sequence:
    Chromosome: V; NC_003283.11 (20208691..20212684, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene F-box domain-containing protein Neighboring gene F-box associated domain-containing protein Neighboring gene Serpentine Receptor, class BC (Class B-like) Neighboring gene Activin_recp domain-containing protein Neighboring gene tRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables RNA-directed DNA polymerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in RNA-templated DNA biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Reverse transcriptase domain-containing protein
    NP_507901.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      20208691..20212684 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_075500.4 → NP_507901.2  Reverse transcriptase domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_507901.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9NAL5
      Conserved Domains (4) summary
      PHA02664
      Location:114 → 238
      PHA02664; hypothetical protein; Provisional
      pfam00078
      Location:786 → 954
      RVT_1; Reverse transcriptase (RNA-dependent DNA polymerase)
      pfam03372
      Location:311 → 526
      Exo_endo_phos; Endonuclease/Exonuclease/phosphatase family
      pfam05285
      Location:218 → 292
      SDA1; SDA1
    Nucleotide Protein
    Heading Accession and Version

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