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    dhs-31 C-factor [ Caenorhabditis elegans ]

    Gene ID: 188051, updated on 9-Dec-2024

    Summary

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    Official Symbol
    dhs-31
    Official Full Name
    C-factor
    Primary source
    WormBase:WBGene00011424
    Locus tag
    CELE_T04B2.6
    See related
    AllianceGenome:WB:WBGene00011424
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable oxidoreductase activity. Predicted to be active in cytoplasm. Is expressed in hypodermis and vulva. Orthologous to human CBR1 (carbonyl reductase 1) and CBR3 (carbonyl reductase 3). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See dhs-31 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    4
    Sequence:
    Chromosome: IV; NC_003282.8 (10039758..10040903, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene C2H2-type domain-containing protein Neighboring gene pseudo Neighboring gene pseudo Neighboring gene Fer-related kinase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene expression markers for Caenorhabditis elegans vulval cells. Inoue T, et al. Mech Dev, 2002 Dec. PMID 14516686
    2. The Caenorhabditis elegans vulva: a post-embryonic gene regulatory network controlling organogenesis. Ririe TO, et al. Proc Natl Acad Sci U S A, 2008 Dec 23. PMID 19104047, Free PMC Article
    3. Comparative genomics and functional study of lipid metabolic genes in Caenorhabditis elegans. Zhang Y, et al. BMC Genomics, 2013 Mar 12. PMID 23496871, Free PMC Article
    4. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
    5. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables oxidoreductase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    C-factor
    NP_001255457.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      10039758..10040903 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001268528.3 → NP_001255457.1  C-factor [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255457.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      D3KFT5
      Conserved Domains (2) summary
      pfam00106
      Location:4 → 216
      adh_short; short chain dehydrogenase
      cl21454
      Location:6 → 254
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    Nucleotide Protein
    Heading Accession and Version

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