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    C17E4.20 HOOK domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 13181457, updated on 18-Sep-2024

    Summary

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    Official Symbol
    C17E4.20
    Official Full Name
    HOOK domain-containing protein
    Primary source
    WormBase:WBGene00219313
    Locus tag
    CELE_C17E4.20
    See related
    AllianceGenome:WB:WBGene00219313
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See C17E4.20 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    3
    Sequence:
    Chromosome: I; NC_003279.8 (9414550..9416703)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Cilia- and flagella-associated protein 157 Neighboring gene E3 ubiquitin-protein ligase marc-3 Neighboring gene ABC2_membrane domain-containing protein Neighboring gene Methyltransferase domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A combined binary interaction and phenotypic map of C. elegans cell polarity proteins. Koorman T, et al. Nat Cell Biol, 2016 Mar. PMID 26780296, Free PMC Article
    2. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    HOOK domain-containing protein
    NP_001251080.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      9414550..9416703
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001264151.4 → NP_001251080.1  HOOK domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001251080.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2FLI6
      Conserved Domains (1) summary
      COG1196
      Location:117 → 404
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein
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