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    pifk-1 Phosphatidylinositol 4-kinase beta [ Caenorhabditis elegans ]

    Gene ID: 180443, updated on 9-Dec-2024

    Summary

    Official Symbol
    pifk-1
    Official Full Name
    Phosphatidylinositol 4-kinase beta
    Primary source
    WormBase:WBGene00018076
    Locus tag
    CELE_F35H12.4
    See related
    AllianceGenome:WB:WBGene00018076
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable 1-phosphatidylinositol 4-kinase activity. Involved in regulation of basement membrane organization. Predicted to be located in mitochondrial outer membrane and rough endoplasmic reticulum membrane. Predicted to be active in cytoplasm and membrane. Is expressed in several structures, including head; intestine; pharynx; reproductive system; and seam cell. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness. Orthologous to human PI4KB (phosphatidylinositol 4-kinase beta). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See pifk-1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    12
    Sequence:
    Chromosome: X; NC_003284.9 (920197..924511, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Presenilin sel-12 Neighboring gene Uncharacterized protein Neighboring gene Rab GTPase-activating protein tbc-11 Neighboring gene Schwannomin interacting protein 1 C-terminal domain-containing protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables 1-phosphatidylinositol 4-kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in phosphatidylinositol phosphate biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in phosphatidylinositol phosphate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in phosphatidylinositol-mediated signaling IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of basement membrane organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endomembrane system IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrial outer membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in rough endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Phosphatidylinositol 4-kinase beta
    NP_508177.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      920197..924511 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_075776.8NP_508177.2  Phosphatidylinositol 4-kinase beta [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_508177.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20077
      Conserved Domains (1) summary
      cd05168
      Location:367666
      PI4Kc_III_beta; Catalytic domain of Type III Phosphoinositide 4-kinase beta