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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001167903.3 → NP_001161375.2 lysosomal dipeptide transporter MFSD1 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) has multiple differences, compared to variant 1, one of which results in a restricted translational frameshift in the 5' coding region. The resulting protein (isoform 2) has a distinct segment and is shorter than isoform 1.
- Source sequence(s)
-
AC080013, AK297593, AK300497, BU608918
- Consensus CDS
-
CCDS54666.2
- UniProtKB/TrEMBL
-
A0A494C105
- Related
- ENSP00000498818.1, ENST00000651862.1
- Conserved Domains (1) summary
-
- cd17340
Location:49 → 388
- MFS_MFSD1; Major facilitator superfamily domain-containing protein 1
-
NM_001289406.3 → NP_001276335.1 lysosomal dipeptide transporter MFSD1 isoform 3
See identical proteins and their annotated locations for NP_001276335.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at an alternate start codon, compared to variant 1. This results in an isoform (3) that has a shorter and distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AK294628, AK297593, BC017661
- UniProtKB/Swiss-Prot
-
Q9H3U5
- Conserved Domains (1) summary
-
- cd17340
Location:14 → 330
- MFS_MFSD1; Major facilitator superfamily domain-containing protein 1
-
NM_001289407.3 → NP_001276336.1 lysosomal dipeptide transporter MFSD1 isoform 4
See identical proteins and their annotated locations for NP_001276336.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at a downstream start codon, compared to variant 1. This results in an isoform (4) that has a shorter and distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AK297593, AK301680, BC017661, BU608918
- UniProtKB/Swiss-Prot
-
Q9H3U5
- Conserved Domains (2) summary
-
- cd06174
Location:1 → 354
- MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
- pfam07690
Location:8 → 330
- MFS_1; Major Facilitator Superfamily
-
NM_022736.4 → NP_073573.3 lysosomal dipeptide transporter MFSD1 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AK297593, BC017661
- Consensus CDS
-
CCDS3185.3
- UniProtKB/Swiss-Prot
- B4DGJ8, B4DMR8, B4DU49, B4DWU1, C9JS94, J3KQL7, Q05C07, Q5XKJ1, Q8IVS1, Q8IXG4, Q9H3U5, Q9H7X1
- Related
- ENSP00000403117.3, ENST00000415822.8
- Conserved Domains (1) summary
-
- cd06174
Location:49 → 427
- MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
RNA
-
NR_110328.3 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) uses an alternate 5' and 3' exon structure, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK297593, BC017661, BC030542
- Related
-
ENST00000480292.5