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    ms4a17a.11 membrane-spanning 4-domains, subfamily A, member 17A.11 [ Danio rerio (zebrafish) ]

    Gene ID: 550363, updated on 2-Nov-2024

    Summary

    Official Symbol
    ms4a17a.11provided by ZNC
    Official Full Name
    membrane-spanning 4-domains, subfamily A, member 17A.11provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050417-157
    See related
    Ensembl:ENSDARG00000094809 AllianceGenome:ZFIN:ZDB-GENE-050417-157
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    ms4a4a; wu:fj02f05; zgc:112035
    Summary
    Predicted to be located in membrane. Is expressed in neuromast mantle cell and neuromast support cell. Orthologous to human MS4A4A (membrane spanning 4-domains A4A). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See ms4a17a.11 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (76575585..76588348)
    105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (74998847..75011610)

    Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene membrane-spanning 4-domains, subfamily A, member 17A.16 Neighboring gene membrane-spanning 4-domains, subfamily A, member 17A.14 Neighboring gene uncharacterized LOC137491380 Neighboring gene membrane-spanning 4-domains, subfamily A, member 17A.9 Neighboring gene membrane-spanning 4-domains, subfamily A, member 17A.8

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    membrane-spanning 4-domains, subfamily A, member 17A.11
    Names
    membrane-spanning 4-domains, subfamily A, member 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001017670.1NP_001017670.1  membrane-spanning 4-domains, subfamily A, member 17A.11

      See identical proteins and their annotated locations for NP_001017670.1

      Status: PROVISIONAL

      Source sequence(s)
      BC093168
      UniProtKB/TrEMBL
      Q567H8
      Related
      ENSDARP00000121446.3, ENSDART00000131588.3
      Conserved Domains (1) summary
      pfam04103
      Location:59196
      CD20; CD20-like family

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007115.7 Reference GRCz11 Primary Assembly

      Range
      76575585..76588348
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)