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    Akip1 A-kinase interacting protein 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 361624, updated on 3-Dec-2024

    Summary

    Official Symbol
    Akip1provided by RGD
    Official Full Name
    A-kinase interacting protein 1provided by RGD
    Primary source
    RGD:1306959
    See related
    EnsemblRapid:ENSRNOG00000013744 AllianceGenome:RGD:1306959
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1306959
    Summary
    Predicted to be involved in regulation of non-canonical NF-kappaB signal transduction. Predicted to act upstream of or within substrate adhesion-dependent cell spreading. Predicted to be active in nucleoplasm. Orthologous to human AKIP1 (A-kinase interacting protein 1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Testes (RPKM 64.0), Lung (RPKM 49.6) and 9 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Akip1 in Genome Data Viewer
    Location:
    1q33
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (173169520..173178445)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (163734730..163743648)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (174330628..174339494)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene DENN domain containing 2B Neighboring gene uncharacterized LOC134483772 Neighboring gene charged multivesicular body protein 1b-like Neighboring gene similar to human chromosome 11 open reading frame 16 Neighboring gene achaete-scute family bHLH transcription factor 3 Neighboring gene TMEM9 domain family, member B

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    General protein information

    Preferred Names
    A-kinase-interacting protein 1
    Names
    A kinase (PRKA) interacting protein 1
    proline-rich protein BCA3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001108497.1NP_001101967.1  A-kinase-interacting protein 1

      See identical proteins and their annotated locations for NP_001101967.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473956
      UniProtKB/TrEMBL
      A0A8I6GIH5, A6I7X8, D3ZV70
      Related
      ENSRNOP00000018497.4, ENSRNOT00000018497.7

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      173169520..173178445
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006229987.4XP_006230049.1  A-kinase-interacting protein 1 isoform X1

      See identical proteins and their annotated locations for XP_006230049.1

      UniProtKB/TrEMBL
      A0A8I6GIH5, A6I7X8, D3ZV70
    2. XM_063267397.1XP_063123467.1  A-kinase-interacting protein 1 isoform X13

    3. XM_063267408.1XP_063123478.1  A-kinase-interacting protein 1 isoform X14

    4. XM_006229990.4XP_006230052.1  A-kinase-interacting protein 1 isoform X3

      See identical proteins and their annotated locations for XP_006230052.1

      UniProtKB/TrEMBL
      A0A8I6GIH5, A6I7X9
    5. XM_063267390.1XP_063123460.1  A-kinase-interacting protein 1 isoform X11

      UniProtKB/TrEMBL
      A6I7Y4, A6I7Y5
    6. XM_039082670.2XP_038938598.1  A-kinase-interacting protein 1 isoform X6

      UniProtKB/TrEMBL
      A0A8I6GIH5, A6I7Y2
    7. XM_039082660.2XP_038938588.1  A-kinase-interacting protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A8I6GIH5
      Related
      ENSRNOP00000089931.2, ENSRNOT00000093972.2
    8. XM_063267383.1XP_063123453.1  A-kinase-interacting protein 1 isoform X9

      UniProtKB/TrEMBL
      A6I7Y4
    9. XM_006229989.4XP_006230051.1  A-kinase-interacting protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8I6GIH5
    10. XM_063267374.1XP_063123444.1  A-kinase-interacting protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A8I6GIH5
    11. XM_063267362.1XP_063123432.1  A-kinase-interacting protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8I6GIH5
    12. XM_063267378.1XP_063123448.1  A-kinase-interacting protein 1 isoform X8

    13. XM_006229988.4XP_006230050.1  A-kinase-interacting protein 1 isoform X1

      See identical proteins and their annotated locations for XP_006230050.1

      UniProtKB/TrEMBL
      A0A8I6GIH5, A6I7X8, D3ZV70
    14. XM_063267377.1XP_063123447.1  A-kinase-interacting protein 1 isoform X7

      UniProtKB/TrEMBL
      A0A8I6GIH5, A6I7Y1
    15. XM_063267388.1XP_063123458.1  A-kinase-interacting protein 1 isoform X10

    16. XM_039082668.2XP_038938596.1  A-kinase-interacting protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A8I6GIH5
    17. XM_039082652.2XP_038938580.1  A-kinase-interacting protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8I6GIH5, A6I7X9
    18. XM_039082689.2XP_038938617.1  A-kinase-interacting protein 1 isoform X12

      UniProtKB/TrEMBL
      A6I7Y4