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    Rnd2 Rho family GTPase 2 [ Mus musculus (house mouse) ]

    Gene ID: 11858, updated on 27-Nov-2024

    Summary

    Official Symbol
    Rnd2provided by MGI
    Official Full Name
    Rho family GTPase 2provided by MGI
    Primary source
    MGI:MGI:1338755
    See related
    Ensembl:ENSMUSG00000001313 AllianceGenome:MGI:1338755
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Arhn; Rohn; rho7
    Summary
    Predicted to enable GTP binding activity; GTPase activity; and protein kinase binding activity. Acts upstream of or within positive regulation of collateral sprouting. Predicted to be located in early endosome. Predicted to be active in cytosol and plasma membrane. Is expressed in brain. Orthologous to human RND2 (Rho family GTPase 2). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in cerebellum adult (RPKM 64.7), CNS E14 (RPKM 55.9) and 22 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Rnd2 in Genome Data Viewer
    Location:
    11 D; 11 65.12 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (101359001..101362679)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (101468175..101471853)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E7067 Neighboring gene STARR-seq mESC enhancer starr_30763 Neighboring gene interferon-induced protein 35 Neighboring gene STARR-positive B cell enhancer ABC_E11494 Neighboring gene vesicle amine transport 1 Neighboring gene predicted gene 11625 Neighboring gene breast cancer 1, early onset Neighboring gene STARR-positive B cell enhancer mm9_chr11:101413133-101413434

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (2)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables GTP binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables GTPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein kinase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in actin filament organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of collateral sprouting IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of collateral sprouting IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of actin cytoskeleton organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in small GTPase-mediated signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in acrosomal membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in early endosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in early endosome ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    rho-related GTP-binding protein RhoN
    Names
    aplysia ras-related homolog N (RhoN)
    ras homolog N (RhoN)
    ras homolog gene family, member N
    rho-related GTP-binding protein Rho7

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009708.2NP_033838.1  rho-related GTP-binding protein RhoN

      See identical proteins and their annotated locations for NP_033838.1

      Status: VALIDATED

      Source sequence(s)
      BC139331, BY275340, CD775326
      Consensus CDS
      CCDS25473.1
      UniProtKB/Swiss-Prot
      O35279, Q9QYM5
      UniProtKB/TrEMBL
      A2A4Q3, A2VCR8
      Related
      ENSMUSP00000001347.7, ENSMUST00000001347.7
      Conserved Domains (1) summary
      cd04173
      Location:7227
      Rnd2_Rho7; Rnd2/Rho7 GTPases

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      101359001..101362679
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)