U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Kti12 KTI12 homolog, chromatin associated [ Mus musculus (house mouse) ]

    Gene ID: 100087, updated on 9-Dec-2024

    Summary

    Official Symbol
    Kti12provided by MGI
    Official Full Name
    KTI12 homolog, chromatin associatedprovided by MGI
    Primary source
    MGI:MGI:1923547
    See related
    Ensembl:ENSMUSG00000073775 AllianceGenome:MGI:1923547
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1110001A12Rik
    Summary
    Predicted to enable ATP binding activity. Predicted to be involved in tRNA wobble uridine modification. Is expressed in several structures, including adrenal gland; brain; genitourinary system; heart; and stomach. Orthologous to human KTI12 (KTI12 chromatin associated homolog). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Kti12 in Genome Data Viewer
    Location:
    4 C7; 4 50.64 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (108705054..108706609)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (108847857..108849412)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene zinc finger, FYVE domain containing 9 Neighboring gene predicted gene, 53266 Neighboring gene STARR-seq mESC enhancer starr_11051 Neighboring gene STARR-seq mESC enhancer starr_11052 Neighboring gene STARR-positive B cell enhancer mm9_chr4:108520274-108520575 Neighboring gene basic transcription factor 3-like 4 Neighboring gene thioredoxin domain containing 12 (endoplasmic reticulum) Neighboring gene RAB3B, member RAS oncogene family Neighboring gene STARR-seq mESC enhancer starr_11058 Neighboring gene RIKEN cDNA 8030443G20 gene Neighboring gene STARR-seq mESC enhancer starr_11059 Neighboring gene STARR-positive B cell enhancer ABC_E520 Neighboring gene STARR-seq mESC enhancer starr_11060 Neighboring gene nardilysin convertase Neighboring gene microRNA 761

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (2) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in tRNA wobble uridine modification IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_029571.2NP_083847.1  protein KTI12 homolog

      See identical proteins and their annotated locations for NP_083847.1

      Status: VALIDATED

      Source sequence(s)
      AK003197
      Consensus CDS
      CCDS18458.1
      UniProtKB/Swiss-Prot
      Q3UG06, Q9D1R2
      Related
      ENSMUSP00000099799.3, ENSMUST00000102738.4
      Conserved Domains (2) summary
      pfam08433
      Location:3347
      KTI12; Chromatin associated protein KTI12
      cl17190
      Location:3106
      NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      108705054..108706609
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)