U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Oprk1 opioid receptor, kappa 1 [ Mus musculus (house mouse) ]

    Gene ID: 18387, updated on 27-Nov-2024

    Summary

    Official Symbol
    Oprk1provided by MGI
    Official Full Name
    opioid receptor, kappa 1provided by MGI
    Primary source
    MGI:MGI:97439
    See related
    Ensembl:ENSMUSG00000025905 AllianceGenome:MGI:97439
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    KOR; R21; KOR-1; MSL-1; Oprk2; K-OR-1
    Summary
    This gene encodes an opioid receptor, which is a member of the 7 transmembrane-spanning G protein-coupled receptor family. It functions as a receptor for endogenous ligands, as well as a receptor for various synthetic opioids. Ligand binding results in inhibition of adenylate cyclase activity and neurotransmitter release. This opioid receptor plays a role in the perception of pain and mediating the hypolocomotor, analgesic and aversive actions of synthetic opioids. Variations in this gene have also been associated with alcohol dependence and opiate addiction. Alternatively spliced transcript variants have been found for this gene. A recent study provided evidence for translational readthrough in this gene, and expression of an additional C-terminally extended isoform via the use of an alternative in-frame translation termination codon. [provided by RefSeq, Dec 2017]
    Expression
    Biased expression in frontal lobe adult (RPKM 1.1), cortex adult (RPKM 0.9) and 8 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Oprk1 in Genome Data Viewer
    Location:
    1 A1; 1 1.89 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (5658673..5676357)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (5588450..5606134)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide pseudogene Neighboring gene proteasome (prosome, macropain) subunit, alpha type 7 pseudogene Neighboring gene STARR-seq mESC enhancer starr_00061 Neighboring gene STARR-seq mESC enhancer starr_00062 Neighboring gene STARR-seq mESC enhancer starr_00063 Neighboring gene STARR-seq mESC enhancer starr_00064 Neighboring gene STARR-seq mESC enhancer starr_00065 Neighboring gene STARR-seq mESC enhancer starr_00066 Neighboring gene STARR-seq mESC enhancer starr_00067 Neighboring gene STARR-seq mESC enhancer starr_00068 Neighboring gene STARR-seq mESC enhancer starr_00069 Neighboring gene STARR-seq mESC enhancer starr_00070 Neighboring gene neuropeptides B/W receptor 1 Neighboring gene STARR-seq mESC enhancer starr_00071 Neighboring gene STARR-seq mESC enhancer starr_00072 Neighboring gene COP9 (constitutive photomorphogenic) homolog, subunit 2 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (5) 
    • Targeted (12)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC151172

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled opioid receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables G protein-coupled opioid receptor activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables G protein-coupled opioid receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables G protein-coupled opioid receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables G protein-coupled opioid receptor activity TAS
    Traceable Author Statement
    more info
     
    enables dynorphin receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables dynorphin receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables dynorphin receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables neuropeptide binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables receptor serine/threonine kinase binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled opioid receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in G protein-coupled opioid receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in adenylate cyclase-inhibiting opioid receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in adenylate cyclase-inhibiting opioid receptor signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in behavioral response to cocaine ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to glucose stimulus ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in conditioned place preference ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in defense response to virus ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in eating behavior ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in immune response ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in locomotory behavior IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in maternal behavior ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of luteinizing hormone secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in neuropeptide signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in phospholipase C-activating G protein-coupled receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in phospholipase C-activating G protein-coupled receptor signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of dopamine secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of eating behavior ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of p38MAPK cascade ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of potassium ion transmembrane transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of saliva secretion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in response to insulin ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in sensory perception of pain IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in sensory perception of pain IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in sensory perception of temperature stimulus ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in T-tubule ISO
    Inferred from Sequence Orthology
    more info
     
    located_in axon terminus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in dendrite ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in neuron projection IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in neuronal cell body ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in perikaryon ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in plasma membrane TAS
    Traceable Author Statement
    more info
     
    is_active_in postsynaptic membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in presynaptic membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in sarcolemma ISO
    Inferred from Sequence Orthology
    more info
     
    located_in sarcoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in synaptic vesicle membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    kappa-type opioid receptor
    Names
    opioid receptor, kappa 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001204371.2NP_001191300.1  kappa-type opioid receptor isoform 1

      See identical proteins and their annotated locations for NP_001191300.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) represents the longer transcript and encodes two isoforms, which result from the use of alternative in-frame translation termination codons. The shorter isoform (1) results from translation termination at the upstream UGA stop codon, while the longer isoform (1x) results from UGA stop codon readthrough to the downstream UGA termination codon. This RefSeq represents the shorter isoform (1). Variants 1 and 2 encode the same isoform.
      Source sequence(s)
      AC124029
      Consensus CDS
      CCDS14809.1
      UniProtKB/Swiss-Prot
      P33534
      UniProtKB/TrEMBL
      Q14AL5
      Related
      ENSMUSP00000027038.5, ENSMUST00000027038.11
      Conserved Domains (2) summary
      pfam00001
      Location:76330
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:70312
      7tm_4; Olfactory receptor
    2. NM_001318735.1NP_001305664.1  kappa-type opioid receptor isoform 1x

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) represents the longer transcript and encodes two isoforms, which result from the use of alternative in-frame translation termination codons. The shorter isoform (1) results from translation termination at the upstream UGA stop codon, while the longer isoform (1x) results from UGA stop codon readthrough to the downstream UGA termination codon. This RefSeq represents the longer, C-terminally extended isoform (1x). As the UGA stop codon has been reported to specify several alternative amino acids (tryptophan, cysteine, arginine and serine), the location of the upstream UGA stop codon in the longer isoform is denoted by an 'X'.
      Source sequence(s)
      AC124029, AK136866, BB079154, L11065, S81111
      Consensus CDS
      CCDS87811.1
      UniProtKB/TrEMBL
      A0A5F8MP90
      Conserved Domains (2) summary
      pfam00001
      Location:76330
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:70312
      7tm_4; Olfactory receptor
    3. NM_011011.3NP_035141.1  kappa-type opioid receptor isoform 1

      See identical proteins and their annotated locations for NP_035141.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) uses an alternate acceptor splice site in the 5' non-coding region and has a shorter 5' UTR compared to variant 1. Variants 1 and 2 encode the same isoform (1).
      Source sequence(s)
      AC124029
      Consensus CDS
      CCDS14809.1
      UniProtKB/Swiss-Prot
      P33534
      UniProtKB/TrEMBL
      Q14AL5
      Related
      ENSMUSP00000125105.2, ENSMUST00000160777.8
      Conserved Domains (2) summary
      pfam00001
      Location:76330
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:70312
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      5658673..5676357
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006495470.1XP_006495533.1  kappa-type opioid receptor isoform X1

      Conserved Domains (2) summary
      cd14964
      Location:531
      7tm_GPCRs; TM helix 2 [structural motif]
      cl28897
      Location:1252
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily