U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Scarna13 small Cajal body-specific RNA 13 [ Mus musculus (house mouse) ]

    Gene ID: 100306943, updated on 17-Aug-2024

    Summary

    Official Symbol
    Scarna13provided by MGI
    Official Full Name
    small Cajal body-specific RNA 13provided by MGI
    Primary source
    MGI:MGI:4360027
    See related
    Ensembl:ENSMUSG00002076601 AllianceGenome:MGI:4360027
    Gene type
    ncRNA
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    U93
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Scarna13 in Genome Data Viewer
    Location:
    12 E; 12 55.04 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (104997334..104997608, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (105031075..105031349, complement)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene calmin Neighboring gene predicted gene, 53761 Neighboring gene STARR-seq mESC enhancer starr_33155 Neighboring gene spectrin repeat containing, nuclear envelope family member 3 Neighboring gene STARR-positive B cell enhancer ABC_E1453 Neighboring gene STARR-seq mESC enhancer starr_33158 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:106251266-106251483 Neighboring gene predicted gene, 31742 Neighboring gene STARR-positive B cell enhancer ABC_E7177 Neighboring gene microRNA 3069 Neighboring gene predicted gene, 46374 Neighboring gene small nucleolar RNA host gene 10 Neighboring gene glutaredoxin 5 Neighboring gene predicted gene, 31884

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Other Names

    • small Cajal body-specific RNA 1

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_028576.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AC140477
      Related
      ENSMUST00020183435.1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      104997334..104997608 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)