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    ETS1-AS1 ETS1 antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 101929517, updated on 10-Dec-2024

    Summary

    Official Symbol
    ETS1-AS1provided by HGNC
    Official Full Name
    ETS1 antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:53932
    See related
    Ensembl:ENSG00000254588 AllianceGenome:HGNC:53932
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    pancEts-1
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See ETS1-AS1 in Genome Data Viewer
    Location:
    11q24.3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (128526142..128530383)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (128559474..128563715)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (128396037..128400278)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902789 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:128292222-128292722 Neighboring gene Sharpr-MPRA regulatory region 2302 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr11:128318161-128319360 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5715 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5716 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5717 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5718 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5719 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5720 Neighboring gene Sharpr-MPRA regulatory region 15716 Neighboring gene ETS proto-oncogene 1, transcription factor Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5721 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5722 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5723 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr11:128362337-128363536 Neighboring gene Sharpr-MPRA regulatory region 9161 Neighboring gene CRISPRi-FlowFISH-validated ETS1 regulatory element GRCh37_chr11:128391955-128393363 Neighboring gene uncharacterized LOC124902790 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr11:128401737-128402434 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr11:128402435-128403132 Neighboring gene NANOG hESC enhancer GRCh37_chr11:128403302-128403803 Neighboring gene microRNA 6090 Neighboring gene NANOG hESC enhancer GRCh37_chr11:128420904-128421445 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5724 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5725 Neighboring gene CRISPRi-FlowFISH-validated ETS1 regulatory element GRCh37_chr11:128422800-128423300 Neighboring gene uncharacterized LOC105369565 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:128446088-128446588 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr11:128452292-128453010 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr11:128453011-128453727 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:128457406-128457612

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_120581.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC043517
      Related
      ENST00000525706.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

      Range
      128526142..128530383
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060935.1 Alternate T2T-CHM13v2.0

      Range
      128559474..128563715
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)