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    TAMALIN-AS1 TAMALIN antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 692159, updated on 10-Dec-2024

    Summary

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    Official Symbol
    TAMALIN-AS1provided by HGNC
    Official Full Name
    TAMALIN antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:32680
    See related
    AllianceGenome:HGNC:32680
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    GRASPOS; GRASP-AS1
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    Genomic context

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    See TAMALIN-AS1 in Genome Data Viewer
    Location:
    12q13.13
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (52006250..52007655, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (51969821..51971226, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (52400034..52401439, complement)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:52301449-52301957 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:52307107-52307940 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:52308586-52309472 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:52311731-52312303 Neighboring gene activin A receptor like type 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6385 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:52317635-52318466 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:52334596-52335170 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:52335171-52335745 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:52345261-52345880 Neighboring gene activin A receptor type 1B Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6386 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6387 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4477 Neighboring gene RNA, U6 small nuclear 574, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:52399414-52400100 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4478 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:52401473-52402158 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:52402769-52403422 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:52403423-52404076 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:52404077-52404730 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:52404731-52405383 Neighboring gene uncharacterized LOC124902934 Neighboring gene trafficking regulator and scaffold protein tamalin Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4479 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:52418471-52419408 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:52419409-52420346 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4480 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4481 Neighboring gene nuclear receptor subfamily 4 group A member 1 Neighboring gene uncharacterized LOC107984510 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4482

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    General gene information

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    Other Names

    • GRASP antisense RNA 1
    • GRP1-associated scaffold protein opposite strand

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_146770.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC028005

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      52006250..52007655 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060936.1 Alternate T2T-CHM13v2.0

      Range
      51969821..51971226 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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