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    Fcmr Fc fragment of IgM receptor [ Mus musculus (house mouse) ]

    Gene ID: 69169, updated on 9-Dec-2024

    Summary

    Official Symbol
    Fcmrprovided by MGI
    Official Full Name
    Fc fragment of IgM receptorprovided by MGI
    Primary source
    MGI:MGI:1916419
    See related
    Ensembl:ENSMUSG00000042474 AllianceGenome:MGI:1916419
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Toso; Faim3; FcmuR; IgM FcR; 1810037B05Rik
    Summary
    Enables IgM binding activity. Involved in humoral immune response mediated by circulating immunoglobulin; immunoglobulin transcytosis in epithelial cells; and regulation of B cell receptor signaling pathway. Acts upstream of or within inhibition of cysteine-type endopeptidase activity involved in apoptotic process; negative regulation of extrinsic apoptotic signaling pathway; and negative regulation of lymphocyte apoptotic process. Located in external side of plasma membrane and trans-Golgi network membrane. Orthologous to human FCMR (Fc mu receptor). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in spleen adult (RPKM 125.7) and mammary gland adult (RPKM 37.6) See more
    Orthologs
    NEW
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    Genomic context

    See Fcmr in Genome Data Viewer
    Location:
    1 E4; 1 56.89 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (130793514..130808528)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (130865777..130880790)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene Fc receptor, IgA, IgM, high affinity Neighboring gene predicted gene 15848 Neighboring gene polymeric immunoglobulin receptor Neighboring gene STARR-positive B cell enhancer ABC_E9184 Neighboring gene STARR-positive B cell enhancer ABC_E9478 Neighboring gene interleukin 24 Neighboring gene STARR-seq mESC enhancer starr_02206 Neighboring gene interleukin 20

    Genomic regions, transcripts, and products

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (4) 
    • Targeted (8)  1 citation

    General gene information

    Markers

    Clone Names

    • MGC144825, MGC144826

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables IgM binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables high-affinity IgM receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables high-affinity IgM receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables polymeric immunoglobulin binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables polymeric immunoglobulin binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables transmembrane signaling receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in cell surface IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in early endosome membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in early endosome membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in external side of plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in lysosomal membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in lysosomal membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in trans-Golgi network membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in trans-Golgi network membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in trans-Golgi network membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    immunoglobulin mu Fc receptor
    Names
    Fas apoptotic inhibitory molecule 3
    IgM Fc fragment receptor
    regulator of Fas-induced apoptosis Toso

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001405893.1NP_001392822.1  immunoglobulin mu Fc receptor isoform 2 precursor

      Status: VALIDATED

      Source sequence(s)
      AC165322
      UniProtKB/Swiss-Prot
      A1KXC4, A1KXC6, A1KXC8, A1KXC9, Q148B9, Q9D8T1
    2. NM_026976.4NP_081252.1  immunoglobulin mu Fc receptor isoform 1 precursor

      See identical proteins and their annotated locations for NP_081252.1

      Status: VALIDATED

      Source sequence(s)
      AC165322
      Consensus CDS
      CCDS15261.1
      UniProtKB/Swiss-Prot
      A1KXC4, A1KXC6, A1KXC8, A1KXC9, Q148B9, Q9D8T1
      UniProtKB/TrEMBL
      A0A0G2LB91
      Related
      ENSMUSP00000048303.6, ENSMUST00000038829.7
      Conserved Domains (1) summary
      cd05716
      Location:25120
      Ig_pIgR; Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      130793514..130808528
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)