U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Sval3 seminal vesicle antigen-like 3 [ Mus musculus (house mouse) ]

    Gene ID: 387564, updated on 27-Nov-2024

    Summary

    Official Symbol
    Sval3provided by MGI
    Official Full Name
    seminal vesicle antigen-like 3provided by MGI
    Primary source
    MGI:MGI:3047714
    See related
    Ensembl:ENSMUSG00000062833 AllianceGenome:MGI:3047714
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Predicted to enable aspartic-type endopeptidase activity. Predicted to be involved in proteolysis and regulation of immune system process. Predicted to be active in extracellular space. [provided by Alliance of Genome Resources, Nov 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Sval3 in Genome Data Viewer
    Location:
    6 B2.1; 6 20.2 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (41945074..41950024)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (41968140..41973090)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene seminal vesicle antigen-like 2 Neighboring gene seminal vesicle antigen-like 1 Neighboring gene STARR-seq mESC enhancer starr_15709 Neighboring gene STARR-seq mESC enhancer starr_15710 Neighboring gene STARR-seq mESC enhancer starr_15711 Neighboring gene seminal vesicle antigen Neighboring gene predicted gene, 34701

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables aspartic-type endopeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in proteolysis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of immune system process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    seminal vesicle antigen-like 3
    Names
    seminal vesicle autoantigen like protein 3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001003952.1NP_001003952.1  seminal vesicle antigen-like 3 precursor

      See identical proteins and their annotated locations for NP_001003952.1

      Status: PROVISIONAL

      Source sequence(s)
      AB098509
      Consensus CDS
      CCDS20059.1
      UniProtKB/TrEMBL
      Q76I99
      Related
      ENSMUSP00000079566.3, ENSMUST00000080742.3
      Conserved Domains (1) summary
      pfam05326
      Location:3123
      SVA; Seminal vesicle autoantigen (SVA)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      41945074..41950024
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)