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    Prss50 serine protease 50 [ Mus musculus (house mouse) ]

    Gene ID: 235631, updated on 9-Dec-2024

    Summary

    Official Symbol
    Prss50provided by MGI
    Official Full Name
    serine protease 50provided by MGI
    Primary source
    MGI:MGI:2447303
    See related
    Ensembl:ENSMUSG00000048752 AllianceGenome:MGI:2447303
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Tsp50; 79H19C
    Summary
    Predicted to enable threonine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in cytoplasm. Predicted to be active in endoplasmic reticulum. Is expressed in heart and pericardium and liver. Orthologous to human PRSS50 (serine protease 50). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in testis adult (RPKM 29.0), liver E14.5 (RPKM 5.0) and 2 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Prss50 in Genome Data Viewer
    Location:
    9 F2; 9 60.79 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (110687032..110693697)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (110857964..110864629)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene serine protease 45 Neighboring gene serine protease 46 Neighboring gene transmembrane inner ear Neighboring gene ALS2 C-terminal like

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3)  1 citation
    • Gene trapped (1) 
    • Targeted (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables threonine-type endopeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables threonine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables threonine-type endopeptidase activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in proteolysis ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    probable threonine protease PRSS50
    Names
    protease, serine 50
    testes-specific protease 50
    testis-specific protease-like protein 50

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001379367.1NP_001366296.1  probable threonine protease PRSS50 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC139378
      Conserved Domains (1) summary
      cd00190
      Location:151381
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    2. NM_146227.4NP_666339.2  probable threonine protease PRSS50 isoform 1 precursor

      See identical proteins and their annotated locations for NP_666339.2

      Status: VALIDATED

      Source sequence(s)
      AC139378
      Consensus CDS
      CCDS23577.1
      UniProtKB/Swiss-Prot
      B2RWS9, Q8BLH5, Q8K466
      Related
      ENSMUSP00000059668.2, ENSMUST00000051097.6
      Conserved Domains (2) summary
      smart00020
      Location:177407
      Tryp_SPc; Trypsin-like serine protease
      cd00190
      Location:177407
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      110687032..110693697
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)