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    Gm4779 predicted gene 4779 [ Mus musculus (house mouse) ]

    Gene ID: 102634296, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Gm4779provided by MGI
    Official Full Name
    predicted gene 4779provided by MGI
    Primary source
    MGI:MGI:3646776
    See related
    Ensembl:ENSMUSG00000045010 AllianceGenome:MGI:3646776
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG212753
    Summary
    Orthologous to human CXorf49 (chromosome X open reading frame 49) and CXorf49B (chromosome X open reading frame 49B). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in testis adult (RPKM 4.5), placenta adult (RPKM 0.9) and 1 other tissue See more
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    Genomic context

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    See Gm4779 in Genome Data Viewer
    Location:
    X D; X 44.66 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (100833938..100838074, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (101790332..101794468, complement)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene tumor protein, translationally-controlled, pseudogene 6 Neighboring gene ribosomal protein SA pseudogene Neighboring gene RIKEN cDNA 8030474K03 gene Neighboring gene ribosomal protein SA pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Interactome mapping of the phosphatidylinositol 3-kinase-mammalian target of rapamycin pathway identifies deformed epidermal autoregulatory factor-1 as a new glycogen synthase kinase-3 interactor. Pilot-Storck F, et al. Mol Cell Proteomics, 2010 Jul. PMID 20368287, Free PMC Article
    2. USP7 represses lineage differentiation genes in mouse embryonic stem cells by both catalytic and noncatalytic activities. Liu C, et al. Sci Adv, 2023 May 19. PMID 37196079, Free PMC Article
    3. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
    4. BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. Stryke D, et al. Nucleic Acids Res, 2003 Jan 1. PMID 12520002, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Variation

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    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein LOC102634296
    Names
    uncharacterized protein CXorf49 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001374240.1 → NP_001361169.1  uncharacterized protein LOC102634296

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the protein-coding transcript.
      Source sequence(s)
      AL805980
      Consensus CDS
      CCDS90741.1
      UniProtKB/TrEMBL
      A0A1B0GR91
      Related
      ENSMUSP00000147427.2, ENSMUST00000147742.9
      Conserved Domains (1) summary
      pfam15483
      Location:74 → 552
      DUF4641; Domain of unknown function (DUF4641)

    RNA

    1. NR_164366.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL805980

    2. NR_164367.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL805980

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      100833938..100838074 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_387015.4 RNA Sequence

    2. XR_878190.3 RNA Sequence

    3. XR_878189.3 RNA Sequence

    4. XR_878188.3 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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