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    Gm34583 predicted gene, 34583 [ Mus musculus (house mouse) ]

    Gene ID: 102637887, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm34583provided by MGI
    Official Full Name
    predicted gene, 34583provided by MGI
    Primary source
    MGI:MGI:5593742
    See related
    AllianceGenome:MGI:5593742
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm42730; Nis-lncRNA
    Expression
    Biased expression in frontal lobe adult (RPKM 1.5), cortex adult (RPKM 1.0) and 2 other tissues See more
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    Genomic context

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    See Gm34583 in Genome Data Viewer
    Location:
    5 C3.3; 5
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (73528258..73550118)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (73370915..73392775)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene OCIA domain containing 2 Neighboring gene STARR-seq mESC enhancer starr_13385 Neighboring gene predicted gene, 34496 Neighboring gene STARR-seq mESC enhancer starr_13386 Neighboring gene predicted gene, 35960 Neighboring gene cell wall biogenesis 43 C-terminal homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. A nerve injury-specific long noncoding RNA promotes neuropathic pain by increasing Ccl2 expression. Du S, et al. J Clin Invest, 2022 Jul 1. PMID 35775484, Free PMC Article
    2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Variation

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    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      73528258..73550118
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_377017.2 RNA Sequence

    2. XR_377016.4 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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