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    Gm773 predicted gene 773 [ Mus musculus (house mouse) ]

    Gene ID: 331416, updated on 27-Nov-2024

    Summary

    Official Symbol
    Gm773provided by MGI
    Official Full Name
    predicted gene 773provided by MGI
    Primary source
    MGI:MGI:2685619
    See related
    Ensembl:ENSMUSG00000073177 AllianceGenome:MGI:2685619
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Acts upstream of or within acrosome reaction and penetration of zona pellucida. Predicted to be located in nucleus. Predicted to be active in synaptonemal complex. Is expressed in several structures, including gonad; liver; lung; muscle tissue; and spleen. Human ortholog(s) of this gene implicated in spermatogenic failure 4. Orthologous to human SYCP3 (synaptonemal complex protein 3). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See Gm773 in Genome Data Viewer
    Location:
    X A5; X 30.06 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (55235187..55258246, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (56189827..56212886, complement)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 3830403N18 gene Neighboring gene multifunctional methyltransferase subunit TRM112-like protein pseudogene Neighboring gene transformer 2 beta homolog pseudogene Neighboring gene high mobility group box 1 pseudogene Neighboring gene predicted gene, 35893 Neighboring gene glycine cleavage system protein H (aminomethyl carrier) pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within acrosome reaction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in meiotic cell cycle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within penetration of zona pellucida IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in sperm DNA condensation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in spermatid development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in synaptonemal complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC331416

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033423.2NP_001028595.1  uncharacterized protein LOC331416

      See identical proteins and their annotated locations for NP_001028595.1

      Status: PREDICTED

      Source sequence(s)
      AK144779
      Consensus CDS
      CCDS30142.1
      UniProtKB/TrEMBL
      Q3TML4
      Related
      ENSMUSP00000099097.2, ENSMUST00000101561.8
      Conserved Domains (1) summary
      pfam04803
      Location:72202
      Cor1; Cor1/Xlr/Xmr conserved region

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      55235187..55258246 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006528099.2XP_006528162.1  uncharacterized protein LOC331416 isoform X1

      See identical proteins and their annotated locations for XP_006528162.1

      UniProtKB/TrEMBL
      Q3TML4
      Conserved Domains (1) summary
      pfam04803
      Location:72202
      Cor1; Cor1/Xlr/Xmr conserved region